Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq27891 96.9 6e-15 seq193568 87.8 3e-12 >seq27891 Length=880 Score = 96.9 bits (106), Expect = 6e-15 Identities = 195/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 107498 GTCAGATCGGACTTGCCCGAGAGCTTCTCGTCCATGGAGCCCGACACGTCCACCATGACC 107557 |||||||| || || || | ||| | |||||||| || || |||||||||| || Sbjct 536 GTCAGATCCGAACGCCCGGACAACTTAGCATCCATGGATCCAGAAACGTCCACCAGCACG 595 Query 107558 ACGGTGCGGCCCGGCAGCTTCGGCATGTCGGCGATCGAGGCGATCAGCGCTTCGTCCAGG 107617 | || |||| | || ||||| || || || || || | || ||| | |||| Sbjct 596 GCTGTATTACCCGAGAACTGCGGCAAATCAGCAATGGAAGCCAGCAACGCCTTATCCAAC 655 Query 107618 GCCGGTTCGAACGTCGGCGCCGCACGAGCCGCCGCGATGTAGCGGAACGGCAGGACGCGG 107677 | || || || || || || ||||| | || ||||| |||||||| || |||||| Sbjct 656 TCTGGCTCAAAGGTGGGGGCAGCACGTGAAGCTGCGATATAGCGGAAGGGAAGGACGT-- 713 Query 107678 TGCGCGCCGCCCTTGCGGGCCTTGATCGCATCGATCACCAGCTTGCGGTCGACTCCGGCC 107737 | | || |||||||| || ||| ||||| |||| | || || |||| | Sbjct 714 TACCTGCT-CCCTTGCGAGCAAGGATAGCATCACGAACCAACGCCTTATCTACACCGGAC 772 Query 107738 TGCTCCATGTTGCGCAGGTTGCGCAGCAGGGCGAGGTAGCCGAGCTT 107784 ||||||||||| |||| ||| |||| ||| || | ||| || ||||| Sbjct 773 TGCTCCATGTTACGCAAGTTACGCAACAGCGCCAAGTAACCAAGCTT 819 >seq193568 Length=296 Score = 87.8 bits (96), Expect = 3e-12 Identities = 124/173 (72%), Gaps = 6/173 (3%) Strand=Plus/Minus Query 139529 AGCAGCCCCAGGGCCTTACGCAGGTCCCAGCCATTCAGGTCCCAGACACCTTCAATCGGA 139588 ||||| ||| ||||| |||| |||||||| || |||| | | || ||||| Sbjct 226 AGCAGTTGCAGCGCCTTGCGCAATTCCCAGCCGGACACGTCCAGTTCGTCGTCGATCGGC 167 Query 139589 CGCTCGATCACGTCGCGCGGCGTCGTCAGCCCCAGATATTGCGAG---AGCGGGCGAACG 139645 ||||||||||||||||| ||| || || || ||| || | || ||| | | || Sbjct 166 AGCTCGATCACGTCGCGCTGCGGCGCCACCCGCAGGTA---CCAGTCCAGCTTGTGCACA 110 Query 139646 TAGAAGAACCGGACGTCGTTGTCGCTATCCGGCGACGGGAAGCCCCAGGCGCG 139698 || | ||| || ||||||| |||||| || ||||| | |||||||||| |||| Sbjct 109 TACAGGAAGCGCACGTCGTAGTCGCTGTCGGGCGAGGCGAAGCCCCAGCCGCG 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 893176672155120