Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019442.1 Length=60523 Score E Sequences producing significant alignments: (Bits) Value seq20500 163 1e-35 >seq20500 Length=13099 Score = 163 bits (180), Expect = 1e-35 Identities = 212/290 (73%), Gaps = 5/290 (2%) Strand=Plus/Plus Query 29273 AAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCACTGACTGAACCCCAGAAAGCG 29332 |||||||| | ||||| || ||| |||| || | ||||||||||| || |||| Sbjct 3405 AAGGCGCTCGATTGGGTAGACCGCAACGTCAAGGTAACGCTGACTGAACCGCAAAAAGTC 3464 Query 29333 GGTATTGCGTCATTCTGTCCTTACAACATTGGCCCAGGTAAGTGTTTCCCGTCGACGTTT 29392 || || ||||| ||||| |||| ||||| ||||| || ||||| ||| | || || ||| Sbjct 3465 GGCATCGCGTCCTTCTGCCCTTGGAACATCGGCCCCGGAAAGTGCTTCACCTCAACCTTT 3524 Query 29393 TATAAACGAA--TTAATGCAGGAGATCGAAAAGGTGCCTGCGAAGCGATTCGCTGGTGGA 29450 || || ||| | || || || || || | ||||||||| | || ||| | |||| Sbjct 3525 TACAA--GAAGCTGAACGCCGGCGACCGCATTGGTGCCTGCCGCGAAATCCGCCGCTGGA 3582 Query 29451 TTAAGGACGGTGGCAGAGACTGCCGTATTCGCTCAAATAACTGTTATGGTCAGGTCTCAC 29510 | | |||| |||| |||| ||||| || ||||| |||| |||||| || ||| ||| | Sbjct 3583 TATACGACGCTGGCCGAGATTGCCGCATCCGCTCGAATAGCTGTTACGGGCAGATCTTGC 3642 Query 29511 GGCGTGACCAGGAGAGCGCGCTGGCGTGCTGGGGAATTGACAGAT-AAGC 29559 |||| ||||| ||| || |||||| |||||||| | |||| || |||| Sbjct 3643 GGCGCGACCAAGAGGCCGAGCTGGCTTGCTGGGGGCTGGACAAATGAAGC 3692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193020405319020