Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq201653 145 2e-30 seq140712 127 4e-25 seq145387 125 2e-24 seq193866 120 7e-23 seq139306 113 1e-20 seq201369 111 3e-20 seq193383 111 3e-20 seq49436 100 6e-17 seq44665 89.7 1e-13 seq55672 84.2 5e-12 >seq201653 Length=261 Score = 145 bits (160), Expect = 2e-30 Identities = 187/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 13758 GCGCAGTTCCTGGAATTTTGGTATCCAGAAATATTCATCCAGGTACAGATTACCGTGATA 13817 |||||||| || ||| || |||||||||||||| ||||| |||||||| || | Sbjct 259 GCGCAGTTTCTTGAAGCCGGGGATCCAGAAATATTCGTCCAGATACAGATTGCCTGGCCG 200 Query 13818 GCTCTGCGCCGTGCGGGCGTTGGTGCCGAGAAAGTACAAAGCGGCCCCATTGGGTAACAC 13877 || ||| || ||| || ||||||||||||||| | ||| | ||| | || || | | Sbjct 199 GCCCTGTGCGGTGTTGGAGTTGGTGCCGAGAAAATGCAATTCAGCCGCGTTTGGCAGGAT 140 Query 13878 CATGGGATCGCCTTTCAGCTCAACATCCACCTCTTTTGCAAAGTCGATGATGTACTGCTT 13937 |||| || || |||||| ||||| ||||||| |||||| || ||||||| | || Sbjct 139 GATGGTTTCCCCGCGCAGCTCCACATCAACCTCTTGCGCAAAGGCGGTGATGTAGTTTTT 80 Query 13938 AAAGACGTGCGCCTGTGCCTTACTGGCAGAAAGGAAAATCTGGTTGCGTCCGGTCAGCAG 13997 || ||||||||| ||||| ||| |||| || ||||| || || || || ||| Sbjct 79 GAACTGGTGCGCCTGCGCCTTGGAGGCGGAAACAAACATCTGATTACGCCCCGTGTCCAG 20 Query 13998 GGCGTCAATCAATGCTTC 14015 |||||| |||| ||||| Sbjct 19 GGCGTCGATCAGGGCTTC 2 >seq140712 Length=381 Score = 127 bits (140), Expect = 4e-25 Identities = 217/312 (70%), Gaps = 2/312 (1%) Strand=Plus/Plus Query 12396 CCAGCGACAGAATGCCGCCGAGTCGGTTGGTGCGCTTCTCCAGATAGGCATTACCGAATA 12455 ||||| || || |||||||| ||||| ||| ||||| | || || ||||| | Sbjct 7 CCAGCTTCATTATCCCGCCGAGGCGGTTATAACGCGACTCCATAAAGCTGTTGCCGAACA 66 Query 12456 CCAGATAGTCCTGCACAAACCGGCTGAACGCCTGCTGGCTAAGAAGTGGATGCGGGATAA 12515 ||| | | |||||| || | |||||||| |||||| || || | || || | | Sbjct 67 CCATAAAATCCTGCGCATAGCGGCTGAAATCCTGCTTTGACAGCAGCCGGTGGGGCTTGA 126 Query 12516 AGGTGCTGGTCAGAATGTTGCGTTTTACCGCAATGGGAGAGCTGTGATGCACTGCGGCAC 12575 | |||| | |||||||| || | || || || || ||||||||||| || || | Sbjct 127 ACATGCTCACTAAGATGTTGCGCTTCATCGTGATCGGTGAACTGTGATGCACCGCCGCGC 186 Query 12576 GGTAGGTTCGCGCCAGCCCGTCAAAGCTGACCGGCGGCTCATACCAGCGGTCCA-TCTGC 12634 || | || |||||| |||| || || ||||||||||||||||| || | || Sbjct 187 GGAACGTCTTCGCCAGGCCGTTGAAAGAGATTGGCGGCTCATACCAGCGATCGACGACGC 246 Query 12635 ACGCATTCCACATAGTCCAGCAGCTCGCGGCGGTCCAGCACCGGGATTGGATCACCAAAG 12694 | ||| |||| ||| ||||| | ||||| || ||||||| |||||| || || || ||| Sbjct 247 A-GCACTCCAGATAATCCAGTATTTCGCGCCGATCCAGCATCGGGATCGGGTCGCCGAAG 305 Query 12695 CTGAAAGCCTCG 12706 | || |||||| Sbjct 306 GTAAACGCCTCG 317 >seq145387 Length=359 Score = 125 bits (138), Expect = 2e-24 Identities = 233/342 (68%), Gaps = 19/342 (6%) Strand=Plus/Plus Query 15961 CATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCAAATCGTGCTGAAAACCC 16020 |||||||||||| | |||||| | ||||||| ||| || || | | ||| Sbjct 1 CATCATGATCGGTTGGAACGGCACCAGCCGCGCCAGAACGTCGGATATCACCGTCAACAA 60 Query 16021 GCTGCTGCAGGACGTCAATAAAGGCTGGTTACAGAAAATCCGCGAAGACGCGCCGGATCA 16080 |||| |||||||||| || | |||||||| |||||| ||||| | | ||||| || || Sbjct 61 GCTGTTGCAGGACGTTAACATCGGCTGGTTGCAGAAAGTCCGCAAGGGTGCGCCAGAGCA 120 Query 16081 TGTTATGGGCAGCACCACAAAAGACGGTGCAACGACTGCAG----GCG-CGGTCAAAGTG 16135 || |||| | || | | || | ||| |||| | | ||| ||| | Sbjct 121 GGTGATGG--------ATAAGGTGCTGGGCGAGGACGGCAGCGTTGTGTCGGAAAAAATT 172 Query 16136 GGCAAGGGC------GGCGACTATGCCAACCTGGACGCCGTGGTGATGGATGCCGTCAAC 16189 ||| ||| || |||||| ||||||||| || ||||||||||||||||||| Sbjct 173 CGCATCGGCACCGATGGTGACTATCACAACCTGGATGCGCTGGTGATGGATGCCGTCAAT 232 Query 16190 GAGCTGATCGACGCGGTTTATCAGGATGATGACGATCTGGTTGTTGTCTGCGGACGTGAA 16249 |||||||||| ||| ||||||||||| ||| ||||| | || || ||| Sbjct 233 GAGCTGATCGCCGCTTGGTATCAGGATGACACCGAACTGGTCGCCGTTGTTGGTCGTTCC 292 Query 16250 CTGCTGTCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAG 16291 ||| || | ||||| |||||||| || |||||| | || ||| Sbjct 293 CTGTTGGCGGACAAATATTTCCCACTCGTCAACCAGGAACAG 334 >seq193866 Length=203 Score = 120 bits (132), Expect = 7e-23 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 13401 CTGCAGCTCGCTGAGCGGGAACACGGACGCGAGATCGTCCACGAACTCACACATCAGCAG 13460 ||||| |||| | |||||| ||||||| |||||| | ||| | ||||| | ||| Sbjct 197 CTGCATTTCGCCCATCGGGAAGACGGACGATGTATCGTCGATGAAGTTGCACATGAACAG 138 Query 13461 GTTCTGGTATTCGTCCGGGCTGTACTCCATGCGCAGCTGGTCGAGGTCGAACAGGTTACA 13520 ||| | | || || ||||| ||| ||||||| ||||||||| ||||||| || Sbjct 137 GTTGTCAAAATCTTCATCGCTGTTTTCCTCTCGCAGCTCGTCGAGGTCAAACAGGTCGCA 78 Query 13521 GCCGCCGCGCACCGCATCCTCCACGGTGACGATCTGGCGGTACTGCCCGTCAGGGCAGAG 13580 ||||||||||| |||||| || | | |||||||||||||| | ||| ||| |||||| Sbjct 77 GCCGCCGCGCAACGCATCTTCAATGTTGACGATCTGGCGGAATTGCTTGTCCTCGCAGAG 18 Query 13581 CAGGCCGCGCGCAAGG 13596 || |||| || ||| Sbjct 17 CACACCGCCGGCCAGG 2 >seq139306 Length=319 Score = 113 bits (124), Expect = 1e-20 Identities = 207/298 (69%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 22072 CTTTATCCTGTGGATGAACAGGACGCGGTGCGGCGCACGCTGGCGCTG-GAATCTGAACC 22130 || || || | ||| |||| ||| || ||||| |||||||||| ||| || || || || Sbjct 298 CTGTACCCGGAGGAAGAACGGGAAGCAGTGCGCCGCACGCTGG-GCTATGAGTCCGAGCC 240 Query 22131 CGTCACCAAGCTGCTGCAGGAAAGCACATACCGCGAAATCCTGCTGCGCCAGCGTATTAA 22190 || ||| | ||||| ||| | | ||||| || | || | |||||||| | || Sbjct 239 GATCGTCAAAGTCCTGCAAGAATCCGCCTACCGTGAGGTGTTGTTACGCCAGCGCGTCAA 180 Query 22191 CGAAGCTGCGCAGGCGGTGATGGTGGCCTATTCGATGGGAAATGATCTTGAGCAGCTGGC 22250 || || |||||||| || ||||||||||| | ||| | | || || || ||| |||| Sbjct 179 TGAGGCAGCGCAGGCCGTAATGGTGGCCTACGCCATGAGCAGCGACCTCGATCAGTTGGC 120 Query 22251 AGCCAACTGCAACGTGAAACGTCTGACGGTAGTGCCTGCTGATAATGATGCAGTACCGCC 22310 |||||| | |||||||||| || | | | | | |||| | ||| || || || Sbjct 119 CGCCAACAACGACGTGAAACGATTGGTGATCGATCAGGGTGATCCGGGTGCTGTGCCACC 60 Query 22311 GGTCGCCGCAG-TGATGGAAGATGATGAGGCGCTGCGCCAGCGCATCCCTGCAGCATT 22367 || |||| | ||||||| |||| | ||||||||||||||||| || || || Sbjct 59 CGT-ACCGCCGACGATGGAAAGCGATGCCGACCTGCGCCAGCGCATCCCCGCCGCGTT 3 >seq201369 Length=218 Score = 111 bits (122), Expect = 3e-20 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 27417 CCGACGGTAAGAAAACGGGCATGAAAGCGCTACTGTCGGCGCAGTCGCAGCTCGGTGTCA 27476 |||| || |||||||| || |||||||| | || | || || ||||| || || | Sbjct 6 CCGAGGGCAAGAAAACCGGTATGAAAGCCTTGTTGGCCGCACAAAGCCAGCTTGGCGTTA 65 Query 27477 AGCCGTGCATTCTTGGGGTGCCGGGACATGACACTCAGGCCGTTGCTACTGAACTGCTGG 27536 |||| ||||| | ||||||||||| || || | |||| ||||| | ||| | |||| Sbjct 66 AGCCCCGCATTTTGGGGGTGCCGGGCCACGATAACGAGGCGGTTGCCTCCGAATTACTGG 125 Query 27537 GCGTGGCGCAAAGCTTGCGCGGGTTTGCCTACCTTGCTGCTAATGGCTGCAAAACGGTGG 27596 ||||||||||||| | |||| || |||||||| || |||||||||| ||||| Sbjct 126 CCGTGGCGCAAAGCCTCCGCGCCTTCGCCTACCTCAGCGCCTATGGCTGCAAGACGGTAT 185 Query 27597 AGGAAGCTATTGCCTATCGCGAGAATTTCAG 27627 || || | | ||| ||| | || ||||| Sbjct 186 CCGAGGCGCTCGACTACCGCAAAAACTTCAG 216 >seq193383 Length=211 Score = 111 bits (122), Expect = 3e-20 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 27096 GCCTTATGGCTCAGGATTACCACCACGGGGTGCGCGTTGTTGAAATCAACGAGGGCACCC 27155 |||| |||||||| || || |||||||| |||||||| ||||||||||| ||||||| Sbjct 37 GCCTAATGGCTCAAGACTATCACCACGGCGTGCGCGTGCAGGAAATCAACGAAGGCACCC 96 Query 27156 GACCTATTACCACGGTGAGCACTGCCATCGTGGGCATGGTCTGCACCGGCGATGATGCTG 27215 | | || ||||| || ||||| |||||||| || |||||||| ||||| || || || | Sbjct 97 GCACCATCACCACTGTCAGCACCGCCATCGTCGGTATGGTCTGTACCGGTGACGACGCCG 156 Query 27216 ATGC 27219 | || Sbjct 157 ACGC 160 >seq49436 Length=832 Score = 100 bits (110), Expect = 6e-17 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 15848 CAGACCAACTTTGATACGGTGCTGACCTACGCAAAACTGGACCTGTGGGCCAAGTTCCAG 15907 |||||||||||||| |||| |||| || | || |||||| |||| || ||| | Sbjct 694 CAGACCAACTTTGACACGGCCCTGAAATATTCCAAGCTGGACGCCTGGGGTAAATTCAAA 753 Query 15908 GACTTCCAGGTGCGTATCCGCAACGCCATCGTCAAGCGTCAGGCGCTGGACCGCATCATG 15967 ||||||||| | ||||| |||||| ||||| || || |||| || |||||||||||| Sbjct 754 GACTTCCAGATCCGTATTCGCAACCAGATCGTGAAACGCCAGGGCCTCGACCGCATCATG 813 Query 15968 ATCGGCTTTAACGGC 15982 ||||| | |||||| Sbjct 814 ATCGGTTGGAACGGC 828 >seq44665 Length=581 Score = 89.7 bits (98), Expect = 1e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 17795 ACGGTGGAGCTTATCTGATGAAAGTGCGTGCGCATCAGTATGACACGGTGGACGCGCTTT 17854 ||||| ||||| |||||||||| || |||||| ||| ||||| || || ||||| | Sbjct 208 ACGGTAGAGCTGATCTGATGAAGGTCTATGCGCACCAGGGCGACACCGTTGATGCGCTGT 267 Query 17855 GCTGGCGTCATTACGGGCGCACGCAGGGTGTCACTGAGCAGGTTCTGCAGGCAAATCCGG 17914 || || | ||||| ||||||| || || |||||||| ||| | ||||| | Sbjct 268 GCCATCGCTACTACGGCAAGACGCAGGACGTGACCGAGCAGGTGTTGCTGAATAATCCAG 327 Query 17915 GGCTGGCTGAGTACGGCCCATTTTTACCGCACGGGCTGCAGGTGGAACTGCCGGACATT 17973 | ||||| || | || || | || |||||||| ||||| || ||||||||||| Sbjct 328 GTCTGGCAGACCAGGGGCCGATATTGCCGCACGGCTACCAGGTCGATATGCCGGACATT 386 >seq55672 Length=385 Score = 84.2 bits (92), Expect = 5e-12 Identities = 105/142 (74%), Gaps = 8/142 (6%) Strand=Plus/Minus Query 33734 GCAATGATGAACTGTCCAGAGTGCGGTCATTCAGCACATACCAGAAGCAGCTTTCAGGTA 33793 || |||||| | ||||| || ||||| || | ||||| |||||| | | || || Sbjct 186 GCCATGATGCATTGTCCTGAATGCGGCCAAGCCGCACACACCAGAT----CGTCGAGTTA 131 Query 33794 --TCAGC--TACGACAAAAGAACGTTACAACCAGTGCCAAAATATAAATTGTGGCTGTAC 33849 ||| | |||||| ||||| || |||||||||||| ||| || |||||||| || || Sbjct 130 CATCACCAATACGACCAAAGAGCGCTACAACCAGTGCACAAACATCAATTGTGGGTGCAC 71 Query 33850 GTTCGTTACTCATGAAACGTTT 33871 |||||| | |||||||| ||| Sbjct 70 GTTCGTCAGCCATGAAACCTTT 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108753284167428