Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq9499 123 5e-23 seq1 87.8 3e-12 seq2002 86.0 1e-11 >seq9499 Length=4611874 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 || |||| ||| ||||| ||||||||||| || || || | | ||||| || ||| Sbjct 3613439 AGCACCTTCTGCTTGAGCTGGGCCACCTGCTCGCGGAGCAGGCTGGCGGTGGAGGCCAGC 3613380 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| |||||| ||||||||||| || | |||||| |||||| Sbjct 3613379 TCCGTGTTCTGGCTCTTGAGGCTCTTCACCTTCTCCTCCAGGCGGGAGATGCGCTCCAGT 3613320 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || | | |||||| |||| ||| || | |||||||| || | || || ||||| ||| Sbjct 3613319 TTCCTCTTGCGGCACTTGGAGGCGGCGATGCGGTTCCTCAGCCGTTTCCGCTCCGCTTTG 3613260 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| ||||| ||||| || ||| Sbjct 3613259 ATGCGCTCCTGCGTGTCCATATCGATGGGGGAC 3613227 >seq1 Length=190651702 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 ||||||| |||||| || || || | ||| || || ||| ||||| |||| | | | Sbjct 189194391 ACTCTCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCACGCTGC 189194450 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || |||| ||| || | || ||||| || ||||||||| |||||||||| Sbjct 189194451 TCTTCTTTCCCAGTGTTCTTCTTTAAGTCAAGAAACTCGAAGATGTCCAGGTGCCACGGC 189194510 Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 |||| |||||||||||| || || || |||| Sbjct 189194511 TCCAGGTAGATGGCAAAAGCCCCAGGTCTCT 189194541 >seq2002 Length=109662234 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 48164 CTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAA 48223 ||||||||| |||| || || ||| |||||||| | || || | || ||||| ||| Sbjct 93266402 CTGATGAGCTCGTTAGAAAAAGTGAGTCCAGGCATTAAGCCTCTTTTCTTCAGCCAAAAA 93266343 Query 48224 ATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||| || ||||||||||| |||||||| || |||||||| || || || Sbjct 93266342 ATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAATGC 93266293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928839668810240