Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq20500 459 8e-125 >seq20500 Length=13099 Score = 459 bits (508), Expect = 8e-125 Identities = 707/999 (71%), Gaps = 16/999 (2%) Strand=Plus/Plus Query 22630 TTCCTGCGGACGAGATTTATGATTGGGTA-GACAGGCAGATCATCAGCGAAAGCGGAAAC 22688 |||||||| ||||| | | || ||| | | || || ||||| ||| ||| | | Sbjct 5097 TTCCTGCGAACGAGGTGCAGGAGTGGATGCGGCAT-CAAATCATTGACGATGCCGGCAGC 5155 Query 22689 CTGTATAACCCGGATCATTTTCATCT-GCATACGGCTGACATTGCG-TTTATGTGGGCGT 22746 |||| |||||| || || || || ||| ||| | | |||| ||||||||||| | Sbjct 5156 CTGTTTAACCCAGACCACGGACACCTTGCAGACGCCGATC--TGCGCTTTATGTGGGCAT 5213 Query 22747 CATCAGCATTCGAGAAAAAAGGCCGGACGGTTCTTGGTCAATGCGAAGAAGTGATGATGC 22806 | || || || ||||| ||||| || || || || || ||||| ||| ||||| Sbjct 5214 CGTCCGCGTTTGAGAAGAAAGGGCGCCATGTGCTCGGCCAGGCTGAAGAGGTGGCGATGC 5273 Query 22807 GTGCTGGTGGATGGCAAAAGTCGAGAATGGAACAGCAGATGCATGAATGGTTCGGGAGAA 22866 | || || || ||||| ||| | | |||||||||||||||||||| |||||||| Sbjct 5274 GCGCAGGCGGCTGGCAGAAGGCCCGGATGGAACAGCAGATGCATGAGTGGTTCGGTGATG 5333 Query 22867 TCCCAGCATTCATTATCACGCTGGCCGCTGACTATTGCGCGGAGTGCTCCGACTTGGATT 22926 | || ||||||||||||||| || || ||||| ||| || |||| || ||| || | Sbjct 5334 TGCCGAAATTCATTATCACGCTCGCTGCCGACTACTGCTCGCAGTGTTCAGACGCCGAGT 5393 Query 22927 TCTGCGCGCTGGTAGAACATGAGCTTTACCACATTTGCCACGCTACTGATGAATTCGGTG 22986 ||||||| ||||| || ||||||||||||||||| || || || || || ||||| | Sbjct 5394 TCTGCGCCCTGGTCGAGCATGAGCTTTACCACATCGCACAGGCCACAGACGATTTCGGCG 5453 Query 22987 CTCCGAAATTTAAACGGGATACCGGATTGCCGGTGCTGAAAATGCGCGGTCACGATGTTG 23046 | || ||||| || ||| || |||||||||||| ||||||| ||||| |||| Sbjct 5454 CACCAAAATTCAACAAGGAA---GGCCAGCCGGTGCTGAAGCTGCGCGGCCACGACGTTG 5510 Query 23047 AGGAATTCGTTGGCGTCGTTCGCCGCTACGGTGCAAGCCGTGACGTGCAGGAAATGGTTG 23106 | || || |||||||| ||||| || || || || ||| || || |||||| |||||| Sbjct 5511 AAGAGTTTGTTGGCGTGGTTCGTCGGTATGGCGCCAGCGTGGAAGTTCAGGAACTGGTTG 5570 Query 23107 ATGCGGCAAACAATAGGCC---GGAAGTGGCTCACGTCGATGTGGCGAGGGCATGCGGAA 23163 ||||||| |||| |||| ||| ||||| || | | | || ||||| ||||| | Sbjct 5571 ATGCGGCCAACA---GGCCTGCGGAGGTGGCACAACTAAACATTGCCAGGGCGTGCGGTA 5627 Query 23164 CGTGCTTATTAAAATTGGCGTGAAATTTTTGACTGATTATGACGAGTGGTGATTTATGGC 23223 ||| | || | |||||| |||| || ||||| | |||| |||||||||||||| Sbjct 5628 ACTGCATGTTGAGGCTGGCGT-AAATATTGGACTGTATTGGACGGATGGTGATTTATGGC 5686 Query 23224 GGTACTAAAAGGACACGTTAAGTCATTCATTGTTCAGTCATTAGCCTGCTTTGATACCCC 23283 | | ||||| | | || || | ||||| ||||||| | || |||||||| ||||| Sbjct 5687 TGCATTAAAACCAGATGTAAAAGCCTTCATCATTCAGTCGCTTGCGTGCTTTGACACCCC 5746 Query 23284 ATCTCAGGTGGTCGATGCCGTCAATAAAGAATTCGGCATTGCGATTACTCGGCAGCAGGT 23343 | | ||| || || ||||| | ||||| || || | || || || |||||||| Sbjct 5747 TACACTGGTAGTGGAGTCCGTCCAAAAAGAGTTTGGGCTAAAAATCACGCGTCAGCAGGT 5806 Query 23344 TGAATCTCATGACCCGACAAAGGCAAATGGTAGGGGGTTGGCTCAAAAGTGGGTGGATAT 23403 ||||||||| ||||||||||||| | |||| | |||| | |||||||| || | Sbjct 5807 TGAATCTCACGACCCGACAAAGGTTAGCGGTAAATCGCTGGCCAAGAAGTGGGTAGACCT 5866 Query 23404 ATTCAACTCTACGCGAGAGCGCTTCCAGAATGAAATCTCCGACATCCCCATAGCCAATAA 23463 ||| || | |||||||| || ||| ||| |||||| || ||||| || || || || || Sbjct 5867 GTTCCACACGACGCGAGAACGATTCAAGACTGAAATTTCAGACATTCCGATCGCTAACAA 5926 Query 23464 AGCCTATCGTCTGCGCGTGCTGCAAAGAATGTCTACGTCGGCCGAGAATATGAAAAACAT 23523 ||||| || ||||||| || | | ||| | ||| | || | ||||||||| Sbjct 5927 GGCCTACCGGTTGCGCGTTCTTGATCGCATGGCGACGCAAACAGAAACCATGAAAAACTA 5986 Query 23524 GGGGATGACAGCTCAGCTACTGGAGCAGGCTGCTAAAGAGGTTGGTGATGCGTATTCAAA 23583 | || | |||||| | | |||||||| || |||||| || ||||||||| | || Sbjct 5987 CGCATTGGCTGCTCAGATCGTCGAGCAGGCCGCGAAAGAGTGCGGCGATGCGTATACGAA 6046 Query 23584 TAAGCAGAGGGTTGAACTAACGGGTAAGGATGGCGGCCC 23622 | |||| ||| || | || ||||| || |||||||| Sbjct 6047 TCGACAGAAGGTAGAGCACACAGGTAAAGACGGCGGCCC 6085 Score = 289 bits (320), Expect = 9e-74 Identities = 376/520 (72%), Gaps = 0/520 (0%) Strand=Plus/Plus Query 20224 AAAACAAAACTTAGCGCCGCAATGCTGGCTCTGATTGCTGCTGGCGCGTCAGCTCCCGTT 20283 ||| ||||||| ||||||| ||||||||| || || || || ||||| || ||||| || Sbjct 3171 AAATCAAAACTCAGCGCCGTAATGCTGGCCCTAATCGCCGCCGGCGCATCGGCTCCTGTG 3230 Query 20284 CTTATGGCTCAGTTTCAGCAAGAAAAAGAGGGCGTGCGGCTGGTGGCTTACCCAGACGGC 20343 | ||| | ||||||||| |||| ||||| ||| || ||| || |||| ||||| Sbjct 3231 ATGATGTCGCAGTTTCAGGAAGAGAAAGAAGGCCAACGCCTGAACGCCTACCAGGACGGA 3290 Query 20344 GGCGGAATCTGGACTATTTGCGGCGGTGTAACTCGCGTTGACGGTAAGCCGGTAGTAAAA 20403 | || |||||||| ||||||||||| || || || |||| ||| ||| || || Sbjct 3291 GTAGGCATCTGGACAATTTGCGGCGGCGTGACAATGGTCAACGGCAAGAAGGTTGTGAAG 3350 Query 20404 GGTATGAAGTTGACCGCCGAGCAGTGCGCGAAGATTGATGCTCTGGAGCAGAAAAAGGCG 20463 || | ||||||| ||||||||| | ||||||| | ||||||||||||||| Sbjct 3351 GGCCAGCGCCTGACCGCTGAGCAGTGCAAGGAGATTGACACAGCAGAGCAGAAAAAGGCG 3410 Query 20464 CTCGACTGGGTGGATCGTAACGTTAAAGTGCCACTCACCGAACCTCAGAAGACAGGGATA 20523 ||||| ||||| || || ||||| || || | || || ||||| || || || || Sbjct 3411 CTCGATTGGGTAGACCGCAACGTCAAGGTAACGCTGACTGAACCGCAAAAAGTCGGCATC 3470 Query 20524 GCGTCGTTCTGCCCGTGGAATATCGGTCCGGGGCGCTGTTTCCCGTCCACGTTCTACCGC 20583 ||||| |||||||| ||||| ||||| || || || ||| | || || || ||| Sbjct 3471 GCGTCCTTCTGCCCTTGGAACATCGGCCCCGGAAAGTGCTTCACCTCAACCTTTTACAAG 3530 Query 20584 AAATTAAATGCTGGTGACCGCATCGGCGCTTGCCGCGAGATTAAACGCTGGATTTGGGAT 20643 || | || || || |||||||| || || |||||||| || |||||||| | || Sbjct 3531 AAGCTGAACGCCGGCGACCGCATTGGTGCCTGCCGCGAAATCCGCCGCTGGATATACGAC 3590 Query 20644 GGTGGCCGCGATTGCCGCATACGCTCAAATAACTGTTACGGGCAAATAGAACGCCGTGAC 20703 | |||||| ||||||||||| ||||| |||| |||||||||||| || || || ||| Sbjct 3591 GCTGGCCGAGATTGCCGCATCCGCTCGAATAGCTGTTACGGGCAGATCTTGCGGCGCGAC 3650 Query 20704 CAGGAAGCGGAATTATCGTGCTGGGGATTGGACGGATGAA 20743 || || || || | | |||||||| ||||| ||||| Sbjct 3651 CAAGAGGCCGAGCTGGCTTGCTGGGGGCTGGACAAATGAA 3690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154505678166912