Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019704.1 Length=44375 Score E Sequences producing significant alignments: (Bits) Value seq20500 210 6e-50 >seq20500 Length=13099 Score = 210 bits (232), Expect = 6e-50 Identities = 342/492 (70%), Gaps = 13/492 (3%) Strand=Plus/Plus Query 41825 GCCGGGGCTTCCGCACCCGTGAT--TCTCGATCAGTTTCTGGATGAGAAAGAGGGTAACA 41882 ||||| || || || || ||||| | ||| ||||||| ||| |||||||| || | Sbjct 3210 GCCGGCGCATCGGCTCCTGTGATGATGTCG--CAGTTTCAGGAAGAGAAAGAAGGCCAAC 3267 Query 41883 GCTTGACAGCATATCGCGACGGCGGCGGACTCTGGACCATTTGCCGTGGTGCAACAATGG 41942 || ||| || || | ||||| | || ||||||| |||||| | || | ||||||| Sbjct 3268 GCCTGAACGCCTACCAGGACGGAGTAGGCATCTGGACAATTTGCGGCGGCGTGACAATGG 3327 Query 41943 TTGATGGCAAGCCAGTAGTACAGGGCATGAAGCTGTCAGCTGAGAAATGCGCCCAGGTAA 42002 | | |||||| || || ||||| | ||| | |||||| | ||| || | Sbjct 3328 TCAACGGCAAGAAGGTTGTGAAGGGCCAGCGCCTGACCGCTGAGCAGTGCAAGGAGATTG 3387 Query 42003 ACGCCATTGAACGCGACAAGGCGCTGGCGTGGGTTGACCGAAATATCAAAGTACCACTGA 42062 || | || | | |||||||| | ||||| ||||| || |||| ||| | |||| Sbjct 3388 ACACAGCAGAGCAGAAAAAGGCGCTCGATTGGGTAGACCGCAACGTCAAGGTAACGCTGA 3447 Query 42063 CCGAACCACAGAAAGCGGGTATCGCTTCTTTCTGCCCATATAACATCGGCCCCGGAAAAT 42122 | ||||| || |||| || ||||| || |||||||| | ||||||||||||||||| | Sbjct 3448 CTGAACCGCAAAAAGTCGGCATCGCGTCCTTCTGCCCTTGGAACATCGGCCCCGGAAAGT 3507 Query 42123 GCTTCCCATCGACCTTCTATAAGCGCATCAACGCAGGTGACCGCATCGGTGCATGCGAGG 42182 ||||| | || ||||| || ||| | ||||| || |||||||| ||||| ||| | Sbjct 3508 GCTTCACCTCAACCTTTTACAAGAAGCTGAACGCCGGCGACCGCATTGGTGCCTGCCGCG 3567 Query 42183 CAATCCGCTGGTGGATTAAAGACGGTGGCCGCGATTGCCGCCTAACCAAAGGCCAGAAGA 42242 ||||||| | ||||| | |||| |||||| ||||||||| | || || Sbjct 3568 AAATCCGCCGCTGGATATACGACGCTGGCCGAGATTGCCGCAT---------CCGCTCGA 3618 Query 42243 ATGGCTGCTATGGTCAGGTTGAGCGACGGGACCAGGAAAGCGCGCTGGCGTGCTGGGGGT 42302 || |||| || || ||| | ||| || ||||| || || |||||| ||||||||| Sbjct 3619 ATAGCTGTTACGGGCAGATCTTGCGGCGCGACCAAGAGGCCGAGCTGGCTTGCTGGGGGC 3678 Query 42303 TAGACCAATGAA 42314 | ||| |||||| Sbjct 3679 TGGACAAATGAA 3690 Score = 87.8 bits (96), Expect = 5e-13 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 39714 TTCGCATTTGAGGATTATTCCCGCAGCGCAGCCAGTGTAAAACGGTGCGATTGCTGCAAC 39773 || ||||| ||||||| ||||||||||| ||||| || | |||||| ||||||| Sbjct 2086 TTTGCATTCCAGGATTACTCCCGCAGCGCGGCCAGCGTCAGGACGTGCGAATGCTGCAGG 2145 Query 39774 GGTGAGGGCTTTATTGATGCTGAGGTATTCA 39804 || |||||||||||||| |||||||| |||| Sbjct 2146 GGGGAGGGCTTTATTGACGCTGAGGTTTTCA 2176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141488727959484