Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019706.1 Length=42780 Score E Sequences producing significant alignments: (Bits) Value seq23847 122 2e-23 >seq23847 Length=8263 Score = 122 bits (134), Expect = 2e-23 Identities = 398/610 (65%), Gaps = 9/610 (1%) Strand=Plus/Minus Query 22042 CGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAA-ATCAATGAGTTACCTCGC 22100 || ||||| ||||||||| |||||| | ||||| | ||||||||||||| | | Sbjct 7487 CGTAGGTCATAGGTTCGAATCCTATAGGGCGTGCCATTAATTATCAATGAGTTACG-CTC 7429 Query 22101 ATTTAAGTAAACCACG-TTCTCCTCTTGTGCCGTATTTGTGCCATTGCGACTTATAATCG 22159 ||| | || | || ||| ||||| ||| ||| |||||| | | Sbjct 7428 ATTCTCCCACTGCAAGATTTTCCAAAAGTGCCAGATTAGTGACATTGCCCGCCAAGACTT 7369 Query 22160 CATCGATTTTGCTCGCGTGCTCGGTGAGATGCCCGGCTGAAAGGTGGGCGTATCTTTGAA 22219 | || ||||| ||||| || ||||| ||||| | || ||||| || || | |||| Sbjct 7368 CGTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAA 7309 Query 22220 CCATTTCGAGAGTTTCCCATCCTCCCATCTCTTTAAGTGCAAGAAGAGAGACACCGGACT 22279 ||||||| | | |||||||| ||||| |||| ||||| ||| | || || | || Sbjct 7308 CCATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCCT 7249 Query 22280 GAACCAGCCAGCTTGCCCAAGTATGCCTCAGGTCATGGAAGCGGAAGTTGCTAATGCCTG 22339 |||||| ||| || ||||| ||||||| ||| || || |||||||| | | || || | Sbjct 7248 GAACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCCG 7189 Query 22340 CCCGC--TTTAACGCTCCCTTCCATGCCTTGTTGCTGTCGGTTCTCATCTTCCTTATCGC 22397 ||| | ||| || | ||||| || ||| || | ||| ||||| | || Sbjct 7188 CCCTCCGTTTCCCGGT--GTTCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAACTGC 7131 Query 22398 TGCTGTTTTTGTTCCGTCGCTTCGGTAGGCAGGTTTGGTGTGGACAAACACCCATCTCTT 22457 || || | ||| | ||| | | | | || || ||||| || | | Sbjct 7130 CGCGGTCACTCCGCCGCCAGGTCGTTTCCGTGCTGTCGTATGCACAAAGACGTACCGTGA 7071 Query 22458 ATGGAGCCCCTGCTGTTTTCTTAATATCTGGCATGCGGTTTCGTTAAGAGGAACTCCGAT 22517 || ||| ||| | | ||| | |||| ||||| ||||| |||| ||| || || Sbjct 7070 GTGCTTCCCAATCTGATCACGCAATGTTCGGCACGCGGTATCGTTCAGAGCAACGCCAAT 7011 Query 22518 CGCATTGCCAGCTTTTGTTTCATCAGGGTGCATCCATGCCA-TTTTCTTATCCAGATCGA 22576 || || || ||||| | | || ||||| |||||||||| |||||| | || || | Sbjct 7010 AGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTTTCTT-TGCATGTCAA 6952 Query 22577 CCTGTGACCACTCAAGGTCTGTAACGTTGGAACGGCGAAGGCCTGTCGTGATTGCAAACA 22636 |||| |||||||| || || | | || |||||||| ||||| || | | ||||| | Sbjct 6951 CCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTTGCCAGGGCAAAAA 6892 Query 22637 TGACCACAGG 22646 ||| || || Sbjct 6891 CGACAACGGG 6882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136398746203944