Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq20500 138 3e-28 >seq20500 Length=13099 Score = 138 bits (152), Expect = 3e-28 Identities = 181/251 (72%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 42972 AAGGCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAGAAAGCG 43031 |||||||| | ||||| || ||||| | || ||| | ||||| ||||| || |||| Sbjct 3405 AAGGCGCTCGATTGGGTAGACCGCAACGTCAAGGTAACGCTGACTGAACCGCAAAAAGTC 3464 Query 43032 GGTATAGCGTCATTTTGTCCCTATAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTT 43091 || || ||||| || || || | ||||| |||||||| ||||| ||| | || || ||| Sbjct 3465 GGCATCGCGTCCTTCTGCCCTTGGAACATCGGCCCCGGAAAGTGCTTCACCTCAACCTTT 3524 Query 43092 TATAAGCGGCTGAATGCCGGTGATCGTAAGGGTGCATGTGAGGCGATTCGCTGGTGGATA 43151 || ||| |||||| ||||| || || | ||||| || | || ||| | |||||| Sbjct 3525 TACAAGAAGCTGAACGCCGGCGACCGCATTGGTGCCTGCCGCGAAATCCGCCGCTGGATA 3584 Query 43152 AAAGATGGTGGGCGCGATTGCCGCATACGTTCAAATAACTGCTATGGACAGGTTATTCGT 43211 | || | ||| || ||||||||||| || || |||| ||| || || ||| | | || Sbjct 3585 TACGACGCTGGCCGAGATTGCCGCATCCGCTCGAATAGCTGTTACGGGCAGATCTTGCGG 3644 Query 43212 CGTGACCAGGA 43222 || ||||| || Sbjct 3645 CGCGACCAAGA 3655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141919541462304