Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019769.1 Length=38964 Score E Sequences producing significant alignments: (Bits) Value seq23847 125 2e-24 seq150764 80.6 7e-11 >seq23847 Length=8263 Score = 125 bits (138), Expect = 2e-24 Identities = 399/610 (65%), Gaps = 9/610 (1%) Strand=Plus/Minus Query 20492 CGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTTAA-ATCAATGAGTTACCTCGC 20550 || ||||| ||||||||| |||||| | ||||| | ||||||||||||| | | Sbjct 7487 CGTAGGTCATAGGTTCGAATCCTATAGGGCGTGCCATTAATTATCAATGAGTTACG-CTC 7429 Query 20551 ATTTAAGTAAACCACG-TTCTCCTCTTGTGCCGTATTTGTGCCATTGCGACTTATAATCG 20609 ||| | || | || ||| ||||| ||| ||| |||||| | | Sbjct 7428 ATTCTCCCACTGCAAGATTTTCCAAAAGTGCCAGATTAGTGACATTGCCCGCCAAGACTT 7369 Query 20610 CATCGATTTTGCTCGCGTGCTCGGTGAGATGCCCGGCTGAAAGGTGGGCGTATCTTTGAA 20669 | || ||||| ||||| || ||||| ||||| | || ||||| || || | |||| Sbjct 7368 CGTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAA 7309 Query 20670 CCATTTCGAGAGTTTCCCATCCTCCCATCTCTTTAAGTGCAAGAAGAGAGACACCGGACT 20729 ||||||| | | |||||||| ||||| |||| ||||| ||| | || || | || Sbjct 7308 CCATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCCT 7249 Query 20730 GAACCAGCCAGCTTGCCCAAGTATGCCTCAGGTCATGGAAGCGGAAGTTGCTAATGCCTG 20789 |||||| ||| || ||||| ||||||| ||| || || |||||||| | | || || | Sbjct 7248 GAACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCCG 7189 Query 20790 CCCGC--TTTAACGCTCCCTTCCATGCCTTGTTGCTGTCGGTTCTCATCTTCCTTACCGC 20847 ||| | ||| || | ||||| || ||| || | ||| ||||| || || Sbjct 7188 CCCTCCGTTTCCCGGT--GTTCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAACTGC 7131 Query 20848 TGCTGTTTTTGTTCCGTCGCTTCGGTAGGCAGGTTTGGTGTGGACAAACACCCATCTCTT 20907 || || | ||| | ||| | | | | || || ||||| || | | Sbjct 7130 CGCGGTCACTCCGCCGCCAGGTCGTTTCCGTGCTGTCGTATGCACAAAGACGTACCGTGA 7071 Query 20908 ATGGAGCCCCTGCTGTTTTCTTAATATCTGGCATGCGGTTTCGTTAAGAGGAACTCCGAT 20967 || ||| ||| | | ||| | |||| ||||| ||||| |||| ||| || || Sbjct 7070 GTGCTTCCCAATCTGATCACGCAATGTTCGGCACGCGGTATCGTTCAGAGCAACGCCAAT 7011 Query 20968 CGCATTGCCAGCTTTTGTTTCATCAGGGTGCATCCATGCCA-TTTTCTTATCCAGATCGA 21026 || || || ||||| | | || ||||| |||||||||| |||||| | || || | Sbjct 7010 AGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTTTCTT-TGCATGTCAA 6952 Query 21027 CCTGTGACCACTCAAGGTCTGTAACGTTGGAACGGCGAAGGCCTGTCGTGATTGCAAACA 21086 |||| |||||||| || || | | || |||||||| ||||| || | | ||||| | Sbjct 6951 CCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTTGCCAGGGCAAAAA 6892 Query 21087 TGACCACAGG 21096 ||| || || Sbjct 6891 CGACAACGGG 6882 >seq150764 Length=391 Score = 80.6 bits (88), Expect = 7e-11 Identities = 75/94 (80%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 23887 AGTAACGGCTTAACGCCTTCAAGAATGTCTTCGCAGCTTCTGTATTTATATTTACCGAAT 23946 ||||| || |||| |||| | || |||||||| | | |||||||||||| |||||| Sbjct 190 AGTAATGGTTTAATTGCTTCCAATATATCTTCGCAATTCCGGTATTTATATTTGCCGAAT 131 Query 23947 GAGTTGTACTGATTCTTTGGCGCGTTCAGATTCT 23980 || ||||||||||||||||| || || | ||||| Sbjct 130 GAATTGTACTGATTCTTTGGTGCTTTTA-ATTCT 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124221084524232