Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq20500 1507 0.0 seq28775 196 1e-45 seq27876 136 1e-27 seq23847 127 6e-25 seq33697 91.5 4e-14 >seq20500 Length=13099 Score = 1507 bits (1670), Expect = 0.0 Identities = 1778/2396 (74%), Gaps = 33/2396 (1%) Strand=Plus/Plus Query 29475 TGGGCAGCCACCGCATTTACCAAAAAAGGCAGGACAGTGCTTGGCCAGGCTGAAGAGGTA 29534 |||||| | |||| ||| || ||||| | ||||| ||||||||||||||||| Sbjct 5207 TGGGCATCGTCCGCGTTTGAGAAGAAAGGGCGCCATGTGCTCGGCCAGGCTGAAGAGGTG 5266 Query 29535 ATGATGCGTGCCGGCGGATGGCAAAAGGCCCGAATGGAACAGCAGATGAATGAGTGGTTC 29594 |||||| || ||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct 5267 GCGATGCGCGCAGGCGGCTGGCAGAAGGCCCGGATGGAACAGCAGATGCATGAGTGGTTC 5326 Query 29595 GGGCACAAGCCGGACTTCATCATCACGCTGGCTGCTGACTATTGCCTGCAATGCTCCGAT 29654 || | |||| | ||||| |||||||| ||||| ||||| ||| ||| || || || Sbjct 5327 GGTGATGTGCCGAAATTCATTATCACGCTCGCTGCCGACTACTGCTCGCAGTGTTCAGAC 5386 Query 29655 TTAGACTTCTGCGCACTGGTAGAGCATGAGCTTTATCACATCGCCCAAGAAGTGGATGAG 29714 || |||||||| ||||| |||||||||||||| |||||||| || | || || Sbjct 5387 GCCGAGTTCTGCGCCCTGGTCGAGCATGAGCTTTACCACATCGCACAGGCCACAGACGAT 5446 Query 29715 TTTGGCTCACCGAAGTTTTACCGCGACTCAGGTAAGCCGAAGCTTTGCATGCGCGGACAT 29774 || ||| |||| || || || || ||| ||||| ||| ||||||| || Sbjct 5447 TTCGGCGCACCAAAATTCAACAAGGA---AGGCCAGCCGGTGCTGAAGCTGCGCGGCCAC 5503 Query 29775 GATGTTGAGGAATTCGTTGGCGTTGTCCGTCGATATGGCGCAAGCGCTGATGTCCAGGAA 29834 || ||||| || || |||||||| || ||||| |||||||| |||| || || |||||| Sbjct 5504 GACGTTGAAGAGTTTGTTGGCGTGGTTCGTCGGTATGGCGCCAGCGTGGAAGTTCAGGAA 5563 Query 29835 TTAGTAGATGCGGCAAATAAACCAGCAGAGGTGGCCCATCTTGATGTTGCCAGAGCATGT 29894 | || |||||||| || | || || |||||||| || || | ||||||| || || Sbjct 5564 CTGGTTGATGCGGCCAACAGGCCTGCGGAGGTGGCACAACTAAACATTGCCAGGGCGTGC 5623 Query 29895 GGTACATGCCTCATGAAGCTGGCGTAAACCTTTATTAACATTGTCATGGAGGAA-----A 29949 |||| ||| | ||| ||||||||||| |||| | ||| |||| | | | Sbjct 5624 GGTAACTGCATGTTGAGGCTGGCGTAAA----TATTGG-ACTGTATTGGACGGATGGTGA 5678 Query 29950 CCGATGGCAGCATTATCGACAGAGGTTAAATCCTTCATCGTCCAGTCATTGGCTTGCTAT 30009 ||||| |||||| |||| || ||| |||||||| | ||||| | || |||| | Sbjct 5679 TTTATGGCTGCATTAAAACCAGATGTAAAAGCCTTCATCATTCAGTCGCTTGCGTGCTTT 5738 Query 30010 GAGCCACCCACAAAAGTAATTGAGCTTGTAAAGGCTGAGTTCAATGTGGAGGTATCGCGC 30069 || | || ||| ||| | ||| || | ||||| | | | |||| Sbjct 5739 GACACCCCTACACTGGTAGTGGAGTCCGTCCAAAAAGAGTTTGGGCTAAAAATCACGCGT 5798 Query 30070 CAGCAAAT---ATCTCAATACTGCCCTGGTAACGCGATGGCAGAGAAGCTCAGCC--AGA 30124 ||||| | |||||| || | | || | | | || | || | | | | ||| Sbjct 5799 CAGCAGGTTGAATCTCACGAC----CCGACAAAG-GTTAGCGGTAAATCGCTGGCCAAGA 5853 Query 30125 AGTGGGTAGATCTCTTTAATAGCACTCGCTTGCGATTCCAGACGGAAATATCTGATATTC 30184 |||||||||| || || | | || || |||||| |||| ||||| || || |||| Sbjct 5854 AGTGGGTAGACCTGTTCCACACGACGCGAGAACGATTCAAGACTGAAATTTCAGACATTC 5913 Query 30185 CGATTGCTAACAAAGCTTACCGGCTTCGCGCGCTGGACAGAATGGCGGCAAATACTGAGA 30244 |||| |||||||| || |||||| | |||| || || | |||||| | | || || | Sbjct 5914 CGATCGCTAACAAGGCCTACCGGTTGCGCGTTCTTGATCGCATGGCGACGCAAACAGAAA 5973 Query 30245 AGATGCGCAACTTCGCGCTTACTGCTCAGTTAATTGAACAGGCTGCTAAAGAGTGCGGCG 30304 ||| |||| ||| | |||||||| | | || ||||| || ||||||||||||| Sbjct 5974 CCATGAAAAACTACGCATTGGCTGCTCAGATCGTCGAGCAGGCCGCGAAAGAGTGCGGCG 6033 Query 30305 ATGCATACACCAATAAGCAGAAAGTAGAGCATACCGGTAAAGATGGTGGACCCATTGAGT 30364 |||| || || ||| ||||| |||||||| || |||||||| || || ||||| |||| Sbjct 6034 ATGCGTATACGAATCGACAGAAGGTAGAGCACACAGGTAAAGACGGCGGCCCCATCGAGT 6093 Query 30365 CTGCTATGCTAACGAAAGATGAATACAAGGCTGCCCGGCGGGAGATGTTGGAGGATGACG 30424 | || | | | |||||||| ||||||||| || ||||||||||||||||||||||||| Sbjct 6094 CGGCCACGTTGACGAAAGACGAATACAAGCAGGCTCGGCGGGAGATGTTGGAGGATGACG 6153 Query 30425 ACTGCTGAGCAAAAGAACTATGCGCGCCGGATAGAGTGCGAAGAGGACGGTCTCTACTTT 30484 |||| |||||| ||| ||||| ||| ||||||||| |||||||| || | || || Sbjct 6154 ACTGTTGAGCAGCGGAATTATGCCCGCAAGATAGAGTGTGAAGAGGATGGGATGTATTTC 6213 Query 30485 GCCCGCTACTTCTTCAAGCAGCGCACGGGCGGCAAGATGATAGTGGCACCTCATCACAAG 30544 |||||||||||||||||||| | || |||||||||||||| || || || ||||||||| Sbjct 6214 TCCCGCTACTTCTTCAAGCAGAGAACCGGCGGCAAGATGATCGTCGCGCCACATCACAAG 6273 Query 30545 GTGATTCAGCAAACGCTGGACAGAGTGATAGATGGCGAGATTAACCGGCTGATCATCAAC 30604 || || || | || ||||| | ||||| |||||||||||| | || ||||| || ||| Sbjct 6274 GTAATCCAAGAGACACTGGATCGTGTGATCGATGGCGAGATTCAGCGTCTGATTATTAAC 6333 Query 30605 GTTCCGCCTGGCTACACGAAAACAGAACTGGCTACCATCAACATGATGGGGCGTGGGCTG 30664 || || || ||||| || |||||||||||||| |||||||| ||||||||| | || ||| Sbjct 6334 GTCCCTCCCGGCTATACAAAAACAGAACTGGCAACCATCAATATGATGGGGAGAGGACTG 6393 Query 30665 GCACTGAATAAGCGCGCCCGTTTCATGCACCTGTCCTACTCGCACAACCTCGCGCTTCTG 30724 || || |||| ||| ||| | |||||||| ||||| || || |||||||| || ||||| Sbjct 6394 GCGCTAAATAGGCGTGCCAGGTTCATGCATCTGTCGTATTCACACAACCTTGCTCTTCTT 6453 Query 30725 AACTCATCCACTGCCCGCAGCATGATTAAGTCGCAAGCCTACCAGGCGATGTGGCCTATG 30784 |||||||| || || || | || || ||||| | || || || | |||||||||||| Sbjct 6454 AACTCATCTACAGCGCGAGGAATAATAAAGTCTCGTGCGTATCAATCCATGTGGCCTATG 6513 Query 30785 GAGCTGCGCGACGATGCTGACAGTAAGGCGATGTGGTGGACGGAGTATGGTGGCGGTGTG 30844 | ||| ||||| |||||||| || |||||||||||||||| |||| ||| ||||| ||| Sbjct 6514 GGGCTTCGCGATGATGCTGATAGCAAGGCGATGTGGTGGAATGAGTTTGGCGGCGGCGTG 6573 Query 30845 TATGCCTCATCGTCAGCAGGTCAGGTAACGGGATTCCGTGCCGGCCACATGGAGCCAGGC 30904 ||||| ||||| ||||||| |||||||| ||||| || ||||| ||||||||||||||| Sbjct 6574 TATGCGTCATCAGCAGCAGGCCAGGTAACTGGATTTCGAGCCGGGCACATGGAGCCAGGC 6633 Query 30905 TGGCAGGGGGCGCTAATTATCGATGACCCGGTTAAACCCGATGACGCCTATTCAGAGACG 30964 ||||| || || || |||| |||||||| || ||||| || ||||| || || |||| Sbjct 6634 TGGCAAGGTGCTCTGGTTATAGATGACCCAGTAAAACCTGACGACGCTTACTCTGAGATC 6693 Query 30965 GTTCGTGACGGCGTAAACAGCCGATTCAACGAGACGATTAAATCTCGTCTGGCTATCGAA 31024 || || || |||||||| | ||| || |||||||| || ||||| || ||||| ||||| Sbjct 6694 GTCCGCGATGGCGTAAATAACCGCTTTAACGAGACAATCAAATCACGACTGGCGATCGAG 6753 Query 31025 ACCACGCCGATGATTGTCATCATGCAGCGCATCCACTATCACGACCTGAGCGGCTATCTG 31084 || ||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct 6754 ACTACGCCGATGATTGTCATTATGCAGCGCATCCACTACCACGATCTGAGCGGTTATCTT 6813 Query 31085 CTGCGCGGCGGCAGTGGTGAGATGTGGCACCACCTGAATCTGCCGGTAATCATCGACAAC 31144 |||||||| ||||||||||||| ||||| || || || ||||||| || ||||||||| Sbjct 6814 CTGCGCGGAGGCAGTGGTGAGAAATGGCATCATCTTAACTTGCCGGTGATTATCGACAAC 6873 Query 31145 AGTCGCTCTTATCAGGAGCAGTACCCTGACAATAGCCACGCCATACCAATTGAGCATGGC 31204 |||| || || | |||||| || || || | |||||| ||||||||||| || || Sbjct 6874 AGTCAGTCATACGCTGCGCAGTATCCAGAAAACACCCACGCTATACCAATTGACCACGGA 6933 Query 31205 TTGCCTGATGGATGGCTCTGGCCGTTCAAGCACAACGAGAGTCATCGCACTGCGCTTTTC 31264 ||||||||||| ||||| ||||| ||||| ||||||||| ||||| || | || || Sbjct 6934 TTGCCTGATGGCTGGCTGTGGCCATTCAAACACAACGAGTCGCATCGAACATCTCTGTTT 6993 Query 31265 TCTCATCGTCGAACAGCCGAAGCGCAGTACATGCAGAACCCTCGCAGGTTCAACGCAGAA 31324 |||||||| || || || ||||| |||||||||||||| |||||| | ||||| || || Sbjct 6994 TCTCATCGCCGCACTGCGGAAGCTCAGTACATGCAGAAGCCTCGCCGCTTCAATGCTGAG 7053 Query 31325 GGCGCGCTGTGGACAGAGCAGATGATTGCAGCAGCACGCGCCCTGAAAATCA---CCGAG 31381 || |||||||||| ||||||||||| || || | | || |||||| || Sbjct 7054 GGGGCGCTGTGGAACGAGCAGATGATAAGTGCTGCTCATGAACTACAAATCAAGCATGAC 7113 Query 31382 CAGCTATCCAGAACGGTTATTGCTATCGACCCGCAAGCCACCAACAGCGAAGAGAGCGAT 31441 || | || | || || | || || |||||||| || ||||||||||| ||||| ||| Sbjct 7114 AAGGT-TC--GCACTGTAGTGGCGATTGACCCGCAGGCAACCAACAGCGATGAGAGTGAT 7170 Query 31442 GAAACGGGGATTGTGGCCGCAAGCTCATACGGTGCAGGGGATAAGCGACAGTACTCAGCC 31501 ||||| ||||| || || || || || || || || || || || || | || | Sbjct 7171 GAAACAGGGATAGTTGCTGCGAGTTCTTATGGCGCTGGCGACAAAAAGCAATTTTCGGTT 7230 Query 31502 GATGGTGACTACAGCGGCAAATATTCCCCTAACGGTTGGGC--AACTCGGGCTATGGACG 31559 ||||| || |||||||| ||||| || || || ||||| || | | ||||| | Sbjct 7231 GATGGGGATTACAGCGGTAAATACTCACCAGCAGGATGGGCCAAAAAAGCGATATGG--G 7288 Query 31560 CTTACAAACAGCATGACGCCGACGCGATCGTGATTGAAACCAACCAGGGCGGCGACATGG 31619 | || |||| ||| | || || |||||||| || || || |||||||| || ||||||| Sbjct 7289 CGTATGAACATCATCAGGCAGATGCGATCGTCATAGAGACAAACCAGGGTGGTGACATGG 7348 Query 31620 CAGAGGACACGCTCCGCAATGCCGGATTCAAAGACCGAATCATCCGCGTCCATGCGAGCA 31679 | ||||| || ||||||||||| ||||| |||| || || ||||| || ||||| || | Sbjct 7349 CGGAGGAAACACTCCGCAATGCAGGATTTAAAGGGCGCATTATCCGAGTTCATGCCAGTA 7408 Query 31680 AGGGTAAGTTCGCGCGAGCTGAGCCAATATCCGCTCTGTATGCACAGGGTCGCGTAGCCC 31739 |||| |||| || ||||| || |||||||| || || || | || ||| | || Sbjct 7409 AGGGGAAGTATGCCCGAGCGGAACCAATATCAGCACTTTACGAGCAAGGTAGGGTGTTGA 7468 Query 31740 ACCGCGGCAATCTCTATCAACTGGAAAACCAGCAGATGGAGTACGTGCCCACCACCTCTA 31799 | | || |||||||| |||||||| |||| |||||||||| | || || || | | Sbjct 7469 ATCAGGGAAATCTCTACGTGCTGGAAAATCAGCTGATGGAGTACATACCGACTACTGCCA 7528 Query 31800 AAAAATCACCCGACCGTCTCGATGCGCTGGTATGGGCGATGACCGAATTAAGCGGC 31855 |||| ||||| ||||| || ||||| |||| | ||| |||| ||| | | |||| Sbjct 7529 AAAAGTCACCAGACCGACTTGATGCCATGGTTTATGCGCTGACTGAACTTAACGGC 7584 >seq28775 Length=3350 Score = 196 bits (216), Expect = 1e-45 Identities = 983/1546 (64%), Gaps = 99/1546 (6%) Strand=Plus/Plus Query 45870 GCGCAAAAACGGCGGACCGGTCTCAGCGGGTGGGATGTATCAGGTAGGCGAGGGTGGGAT 45929 |||| | |||||||| || || || || | |||||| |||||||| ||| |||| Sbjct 1819 GCGCTATAACGGCGGCCCTGTTAGCGCTGGCGCGATGTACCAGGTAGGTGAGCAAGGGAA 1878 Query 45930 GCCGGAGATTTACCAGGCCAGTACCGGCAAGCAATATATAATTCCGGGCGACAACGGCAG 45989 ||| |||||||||||||| || || || ||||| || || || || || |||||||||| Sbjct 1879 GCCAGAGATTTACCAGGCGAGCACTGGTAAGCAGTACATGATCCCCGGTGACAACGGCAA 1938 Query 45990 AGTGATAAGCAACAAGGAGATG-ACGGCGGGGGCAAGTGGCGGGGTGGTAATCAACATCC 46048 ||||| ||||||||||| ||| | ||||| || || | ||| ||| ||| Sbjct 1939 GGTGATCAGCAACAAGGACATGCAAGGCGGTGG-TGGTATCAACGTGAATGTCAGTATCA 1997 Query 46049 AGAACTACACATCG--TCCTCTGTAGATGCTAAGGCCGGAGCTGATGGCAATGGCGGTGT 46106 | ||| || || || || | ||||||| ||| | |||||||||||||||||| Sbjct 1998 ACAAC-AC-CAACGGTTCATATGTAGATCACCAGGTAAGCAGTGATGGCAATGGCGGTGT 2055 Query 46107 GACCGTGGATGTAATCGTCGCCGACCTGAACAATGGCGGTCCAATCAGCAACGCCATAAC 46166 | |||| || | |||| ||| || |||| ||||| || || ||| | ||||||| Sbjct 2056 CTCGATGGAGATATTTATCGCTGACATGGACAACGGCGGCCCGATGAGCCAAGCCATAAG 2115 Query 46167 CAGCAA-CATGAACGTTAAACGCACGCCAAGAGGACAA--------GGC-TGATGGCTAT 46216 | || ||| | | |||| | ||| | || ||| | | ||| Sbjct 2116 TCGAAATCAT-CAGGCCCCTCGCAGGGCAACCCAATAACCCGCTTCGGCGGGTTTTTTAT 2174 Query 46217 TATCG--------------------ACTATCCCGAATGGCTGCCGTTGGCGCAGAAAGCC 46256 || || ||||||||| ||||| | | | ||||| ||| Sbjct 2175 TACCGGGAGAAAACCGTGGCAATACCCTATCCCGACTGGCTATCACTTCCCCAGAAGGCC 2234 Query 46257 AGCAAAAATATGACCTTCGACACCGGGTTTCAGACTGAACAGCCAGCAGTCGGCCCGGCT 46316 | ||| | || | || ||||||| | || || ||||| ||||| ||| || || Sbjct 2235 AACAAGAGCCGCACGATTGATGCCGGGTTCCGCACCGATCAGCCGGCAGTGGGCGCGCCT 2294 Query 46317 ATTTTCCAGAACCTTACTGACGACCTGAAAACCACATGGTCGCTGACGTGGATGTTCACG 46376 || || ||| || || || ||||| ||||| || |||||||||| |||||| |||||| Sbjct 2295 ATCTTTCAGCGTCTGACAGATGACCTCAAAACTACCTGGTCGCTGATGTGGATTTTCACG 2354 Query 46377 CTGGACCAGGAGCGGGCTTTCCAGCAGTGGCTGCGCAGCCCGAACTACCTGAATCGCGGT 46436 ||| | | || ||||| ||| |||||||| |||||||| ||||| || ||| Sbjct 2355 CTGCAAGAAGATCGGGCATTCGAGCAGTGGTATCGCAGCCCTCGTTACCTTGATAACGGC 2414 Query 46437 GTTAACTGGTTTCGGATGCCCATCAACATCGGCGGCAGTGGCTTGCAGGTTCAGGAGTTG 46496 | | ||||| ||||| ||| | || ||| |||| |||| | ||||| || Sbjct 2415 AATCAGTGGTTCACGATGCTGTGCAATCTGGGGGGCTCTGGCCTGCAACTGCAGGAACTG 2474 Query 46497 CATTTCACACAGATGCCGGTGCAAACCAGCATCGACGGCGGAGTGGTTACGTGGACAGGC 46556 |||||| | |||||| ||||| |||||| ||||| | |||||||| | Sbjct 2475 CATTTCGTGGCGCCGCCGGTTCAAACGAGCATCAACGGCAACACGACGACGTGGACGGCG 2534 Query 46557 ACTGTTATCGCCAACCATCTCTATAACCCTGACGACGAGTTCGACGACATCATTGTTGAG 46616 | || ||| | | ||| |||| || ||||| | || || || || || ||| Sbjct 2535 AGCGTAATCACTCGGAAGGTCTTCAACCAGGATGACGACTACGCAGAGATGATAGTAGAG 2594 Query 46617 CTTCCTCCGCCGTGGGATTCATGGTTGGATA-TCGTTGTCACTGGCTATCCG-GACGGGC 46674 || | || ||| || | | ||| ||| | | ||| || | | || | Sbjct 2595 CTGTCGCC----TGG---CCAGAGGGGAATACTCGACG-AAGTGGTTAACAGAGAAATG- 2645 Query 46675 GCGATCCGGAGTCACTACCGAGGGTGCCGTAATGCCGAGCCTAAGGGAGTACAAGCAACA 46734 ||||||| || |||||| | || | || | || ||| Sbjct 2646 -----CCGGAGT----------TTTG----AATGCCTACATTACGAGAATTTCAGTCACA 2686 Query 46735 GCGCCCGACGCGCGGCCTATACGACACAATCACGTTCTATCACCCGTCATTCGGATACGT 46794 ||| || | || | | |||||||| || ||||| ||||||| | || || | Sbjct 2687 GCGGCCAAACCGGATCATCTACGACACGATGACGTTTAGTCACCCGGCGTTTGGCGCTAT 2746 Query 46795 CCGCCTGGTAGACAAGCAGTTCTTCGACAAAACGCTTGGCGGCCAGGTGTACACCCCGGC 46854 || ||||| | || ||| | | | || ||| | | ||||||||||| | || Sbjct 2747 TCGGCTGGTGGCTAACCAGATATACCCGAAGACGTTCGCCGGCCAGGTGTTTTCAGCGTG 2806 Query 46855 ACGATTTGAAATCGAAGAGAGCCAGCAGAGCGGTACTCCGGTGATCGACGCGACGGTGAA 46914 ||| | || ||| |||||||||||||||| | || ||||||||| || | |||||||| Sbjct 2807 TCGAATGGAGGTCGCAGAGAGCCAGCAGAGCAGCACGCCGGTGATCAACTCAACGGTGAA 2866 Query 46915 ACTTGGGCGTCTTTCGTCGGACATCAAAGCGCTGATGAAGAAGTGGAGGGGAGCGTCTCG 46974 | | ||||| || || ||| |||| || | ||||| ||| | | || || Sbjct 2867 ATTCGGGCGCCTGGCGCAGGATTTCAAGCAGCAGCTGAAGCTATGGCGCGCGCACTCACG 2926 Query 46975 CTTGAAGGCAATCACAGCGACGCGGCAGATATTCGACAGTGGAGACGTGTCTGCGCCGAT 47034 | | | | | ||| | || ||| ||| ||||| | |||| | ||||| | Sbjct 2927 CATAACGCCGATCTCCGCCACGTATCAGCGTTTCGATGCGGCAGACATCAACACGCCGCT 2986 Query 47035 TAAGTCGTGGCAACTCTACGTCAAGACTGTAGACATCGACGCAGATGCTGCATCAGTAA- 47093 ||||| ||| || || || || |||| | |||| ||| |||| Sbjct 2987 GAAGTCATGGACGCTTTATGTGAA------AGACGCCTCTCTTGATGAGGCAGACGTAAC 3040 Query 47094 -----CCCTCTCAGTAACCAACCCGCTAAACAACAACATAGGCCGCCTTTATGA-TCCAC 47147 | ||| || | |||||||||||||||||||| ||| || || | |||| Sbjct 3041 GTGCTCGCTCACACTGCAGAACCCGCTAAACAACAACATCGGCTTGCTCTACAACACCAC 3100 Query 47148 AGGAATACACAGG--TCTTCAGTACCT----CTGATTTC-GTCAAGCGGGTTATTG-GCG 47199 |||| |||| || || | | | |||| ||| ||| || || | | | Sbjct 3101 -TGAATTTCCAGGACTCGCCAATGCATAAACCTGACTTCATTCACGC----CATGGAGGG 3155 Query 47200 T--GCCGTGG-GCGAACCGCGCCTGCTCGTTCGA-GAAGGTAGACTGTTGGGGCTTGGTT 47255 | || ||| ||| | || || ||||| ||||| | || | || || ||||| |||| Sbjct 3156 TAGACCATGGCGCG-ATCGGGCGTGCTCATTCGACGCAGCT-GATTGCTGGGGGCTGGTG 3213 Query 47256 ATTCTTTATTACCGCCACGTGCTTGGTATTGAGCTACACCAGACACCGGACTACGAAGCC 47315 | || |||||||| |||||||| || || ||| ||||||| || ||||||||||||||| Sbjct 3214 GTGCTGTATTACCGGCACGTGCTCGGCATAGAGATACACCAAACGCCGGACTACGAAGCC 3273 Query 47316 GGGGCCGACTTCTTCACCTGCTATGAGGGTGACGTAGTTTTCTGGC 47361 || ||||||| | || || | | ||||| || || ||||||| Sbjct 3274 GGCAGCGACTTCCTGACGTGTTTTTCCGGTGATGTTGTGTTCTGGC 3319 >seq27876 Length=5349 Score = 136 bits (150), Expect = 1e-27 Identities = 311/465 (67%), Gaps = 10/465 (2%) Strand=Plus/Minus Query 1290 AACGTCGTTCATCCTACTGATACGCTGGTACGTGTCAAAGTTCGGGCGACAGAAAACGCG 1349 || || ||| |||| | ||| ||||| ||| || | || ||||||||| |||| Sbjct 3805 AATGTTGTTTATCCGAATGACACGCTCGTAACCGTAACTGTCACTGCGACAGAACGCGCG 3746 Query 1350 CT---TGGAAGTCGCGAACGCAAATATAACGCTCTCGTTACGCGCCATACCATCACTTAT 1406 || ||| || || ||||||||||| || | || ||||| ||||| || Sbjct 3745 ACCAGTGCAAGG---GAGCGAAAATATAACGCCCTAATCACCCGCCACGTCATCAGCTAC 3689 Query 1407 AACCTGAACACGCAGACTGTAGATTACACCCTGCGACCGTCTCGCTCGTTCGCTGATGCG 1466 |||||| ||| ||||| || |||||||| | || || || ||||| || || || Sbjct 3688 AACCTGGCCACACAGACAGTCGATTACACAGAAAGGCCTTCACGTTCGTTTGCGGACGCT 3629 Query 1467 GTGGCGCATACCTGGCTCATCATGGGTGAGCAGTCGGTCAGCAGCATTGACCTGTACGGT 1526 || ||| |||||||| | ||||| | ||| ||| || || ||| | |||| Sbjct 3628 GTATTGCACACCTGGCTAAAGATGGGCGGTCAGCCGGAGTCGAGTATCGACATCTACGAA 3569 Query 1527 CTGTACTCTATTGCTGAGAGCCTGCCTGACGATCGTCTGGGTTACTTCGACTATACGTTT 1586 || |||||||| || | |||| || | || |||| || ||||| || || || Sbjct 3568 CTTTACTCTATCGCGGCATCGTTGCCGGATCAGCGCATGGGGTATTTCGATTACACATTC 3509 Query 1587 GACGACGAGAACGACTCGCTCGGCGACCGCGTGCAGGCCATCTGTAATGCGGCATCGGTG 1646 || || || | |||||| ||| || | ||| | |||||| ||||||| | ||| Sbjct 3508 GATGATGAAGATATCTCGCTGGGCTCTCGGATTCAGACGATCTGTGATGCGGCCACCGTG 3449 Query 1647 GTGGCGTACTGGGACGACGGTGTACTTACATTCACACGTGACCA--GAAAGTGGATTACC 1704 ||||| |||||| | ||| || | | ||||| ||||| | |||| || | Sbjct 3448 ACGGCGTTCTGGGATGGCGGGGTGTTGTCTTTCACGCGTGATGAACGAAAACCGA--ATG 3391 Query 1705 CGGCGGCAGTATTCAACCGGGCCAACATGAAGACGGACGAGTACA 1749 || || | ||||||||||| ||||||||||| |||| || |||| Sbjct 3390 CGACGACGGTATTCAACCGCGCCAACATGAAAGCGGAGGATTACA 3346 Score = 105 bits (116), Expect = 2e-18 Identities = 255/386 (66%), Gaps = 20/386 (5%) Strand=Plus/Minus Query 255 TCTCCAAATAATAGCCTTACAGGACAGACTAACACCGCGCGCGTCTATAAAGCCAAGCCG 314 || || || || ||||| | ||| || || |||| ||||| | | | || ||||| Sbjct 4828 TCCCCGAACAACAGCCTGAAAGGGCAAACCAACATTGCGCGAAACGGTGAGGCAAAGCCT 4769 Query 315 GATATTTATGGTCAGGTGAGGTCATTTCCTGACCTTATTCAGGAATCTGTTTTCGAATAT 374 || | || || |||||| | | | |||||||| |||||||| || | ||||| || Sbjct 4768 GACAACTACGGCCAGGTGCGCGCGTACCCTGACCTGATTCAGGAGTCGCTGTTCGAGTA- 4710 Query 375 GTGCGTCAGAATGATAAAGATGGCGGACTGAAGTACGTAACAGAGTGGCTGTGCGTCGGG 434 || || | || |||| | || ||||||||| || | ||||| Sbjct 4709 ---CGACAACAACATCAAGA--------------AAGTCACAGAGTGGATGAACTTCGGG 4667 Query 435 ATAGGTAAGTACGATTACGAGTCCGTTAGGTACTCCGAATCGAGCCTCGGCTCACTGGCT 494 | || ||| || | ||| || |||||||| ||||||| ||| || | |||||| Sbjct 4666 CTCGGCCGGTATGACGTCACGTCAGTAAGGTACTCAGAATCGAACCTGGGAGCGCTGGCT 4607 Query 495 GGGGCTGAATATCAGTTTTATCAGCCCGGTGAAGCCATCCCCCAAATCGTCGAGGGCTAC 554 || ||| ||| | | || ||||| || || || || | ||| ||||| | | Sbjct 4606 GGCGCTTCATACCGCATCTACCAGCCAGGCGAGAATATTCCGCTGATCAATGAGGGGTTC 4547 Query 555 GGGTTTGATGACGTAGATGGGCAGGAGGTGCCTGGGCAGAACGA-AGCTGGAGATTTCCC 613 | || || ||| | || || |||||| | ||||||| |||||| ||| || ||||| || Sbjct 4546 GCTTTCGACGACATCGACGGACAGGAGCTTCCTGGGCCGAACGAGAGC-GGTGATTTTCC 4488 Query 614 GATAGAAACGGCGACGGCAAATACCG 639 ||||||||||||| ||| |||| Sbjct 4487 TGCAGAAACGGCGACGACAACCACCG 4462 >seq23847 Length=8263 Score = 127 bits (140), Expect = 6e-25 Identities = 345/521 (66%), Gaps = 25/521 (5%) Strand=Plus/Minus Query 7603 GTCTATTTGCTTCGCGTGCTCGGTCAGGTGATTAGGTGCCAGATGTGCATAACGGCGGAC 7662 ||| |||| |||| || ||||| || || | || | || || ||||| || | || Sbjct 7367 GTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAAC 7308 Query 7663 CATTTCTATTGACTCCCATCCTCCCATCTCCTGAAGAACCGAAATCGGGACGCCCGCCTG 7722 ||||||||| ||||||||| ||||| || || || |||||| || ||||| ||||| Sbjct 7307 CATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCCTG 7248 Query 7723 AACTAACCAGCTTGCCCAAGTGTGTCTCAGGTCATGGAAGCGGAAATCCTCAATGCCAGC 7782 ||| ||||| || ||||| || || | ||| || || ||||||||||| || || || Sbjct 7247 AACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCCGC 7188 Query 7783 ---ACGTTTAAGCGCAGCCCTCCACGCCGTGTTTGCGTCGTAACGCATTTTCCTCACTGT 7839 ||||| | | | |||| || | ||| | || ||||||||||| |||| Sbjct 7187 CCTCCGTTT---CCCGGTGTTCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAACTGC 7131 Query 7840 C---GGAACTTTGGTTCCATCTGGCCGGGTGC-AGCTTTCCTTGTAGACAAAAACCCACT 7895 | | ||| | || | || || | | ||| | | | | ||||| || || Sbjct 7130 CGCGGTCACTCCG---CCGCCAGGTCGTTTCCGTGCTGT-CGTATGCACAAAGACGTAC- 7076 Query 7896 TGTG-GTGATTGCCTATTTGCCTTTTCA-GCA---CACGACATGCAGTATCATTCAGCGC 7950 ||| ||| || || || || ||| ||| || || || ||||| ||||| || Sbjct 7075 CGTGAGTGCTTCCCAAT----CTGATCACGCAATGTTCGGCACGCGGTATCGTTCAGAGC 7020 Query 7951 CACGCCAATGGCCTGATTTNNNNNNNNNNNNNCCGGGTGTATCCACGCCACCCGGCGCTG 8010 |||||||| |||| | | ||||| ||||| |||||| | || Sbjct 7019 AACGCCAATAGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTTTCTTTG 6960 Query 8011 CATGTCTATCTGCTGCCATTCAAGATTGATGATGTTCGACCGCCGTAGCCCCGTCGCCAG 8070 |||||| | |||| ||| || |||| |||||| || || || ||||| || || ||||| Sbjct 6959 CATGTCAACCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTTGCCAG 6900 Query 8071 CGCAAACTCGACAACGGACTTAAGCGGGTCTGGGCATTCAT 8111 ||||| ||||||||| | ||| | | || ||||| ||| Sbjct 6899 GGCAAAAACGACAACGGGCCTAAACTGTTC-CGGCATGCAT 6860 >seq33697 Length=3572 Score = 91.5 bits (100), Expect = 4e-14 Identities = 186/270 (69%), Gaps = 5/270 (2%) Strand=Plus/Plus Query 16056 TGCGTGACACGCAAAGCGCCTTGCGCATATTTTTTATTTCGCAT-ATTATGCGTATAGCG 16114 ||||| |||||||||||| |||||||| | | || ||||| | ||||||| ||||| Sbjct 2795 TGCGTCACACGCAAAGCGTCTTGCGCAAAAATGAAATG-CGCATTAATATGCGTGTAGCG 2853 Query 16115 CATTACGGAGGTGCAA-TATGCAGACGCCACTTAGAAAAATGCGTGTAGAGAAAAAGCTG 16173 || | ||| || |||||| || ||||||||||| ||||||||| ||||| |||| Sbjct 2854 CAATTAAAAGGGGCCGCTATGCAAACACCACTTAGAAATATGCGTGTAAAGAAAGAGCTC 2913 Query 16174 ACAATCGCCGAGGTAGCCATCGCAACACAGTTG-GACGTTGGCAACCTCAGCCGAATCGA 16232 | ||| | || |||||| || || ||| ||| ||| |||| ||||| | || Sbjct 2914 AAGATCACTGATGTAGCCCATGC-GGTCAATTGTGACCCTGGTTACCTGAGCCGTGTAGA 2972 Query 16233 AAGGGGAATGCAGGTTCCATCTCTCGAAACAGCTGAGAAGCTCGCAAAGTTCTTCAAGGG 16292 | | || |||| |||| | || ||||| ||||| | |||| | || Sbjct 2973 ACGTGGCGTGCATACAGCATCGCCTGAGTTGGCTGAAAAGCTATCTCGATTCTACTCCGG 3032 Query 16293 GAAGATTAGCGAGATGCAGATTCTCTACCC 16322 |||| | |||| |||| ||||| ||||| Sbjct 3033 TGAGATCACCGAGCTGCAAATTCTTTACCC 3062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151815487182636