Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq142870 131 1e-25 >seq142870 Length=314 Score = 131 bits (144), Expect = 1e-25 Identities = 204/289 (71%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 106701 CGCCATCAACTGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACACGCCTTTTTG 106760 |||||||| ||| || ||||| |||||||| || || | ||| |||| |||||| || || Sbjct 6 CGCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTG 65 Query 106761 CGGCTTCTGTATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGGCGCGCCCTTT 106820 || || || | || || | |||||||| || || ||||| || || |||| || | Sbjct 66 CGCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTG 125 Query 106821 GCATGATTTTTGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCA-TCGTTTATTC 106879 || || ||||| | | ||||| || || | ||| |||| ||||| || | Sbjct 126 ACAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATC-TCTTTCAGGCTGTCGTTGATGC 184 Query 106880 CATCACCGCCGCAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGGGCAGCGGGA 106939 ||| ||||||||||| || ||||| ||||||| | || | | || || ||||| Sbjct 185 CATTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGA 244 Query 106940 CTTTATCTACGGGAAAATTGCGGCCATACACGCCCCATTCGACAAAATA 106988 || || |||| |||||||| || || |||||||| ||||| ||||| Sbjct 245 TCTTGTCGACGGTGAAATTGCGCCCGTAAACGCCCCACTCGACGAAATA 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424205669747394