Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq9582 228 9e-55 seq6870 226 3e-54 >seq9582 Length=68461266 Score = 228 bits (252), Expect = 9e-55 Identities = 650/990 (66%), Gaps = 12/990 (1%) Strand=Plus/Minus Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106 ||||||| || ||| |||| ||| | || || || ||||| || || || ||| Sbjct 34026355 TGTCGCAAATATTCTTCCAAACACTTCACTGCAAAAGGATCAACATCAGTATCAAACTTA 34026296 Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166 || || || | ||||| ||| | || ||||||| || |||||| || ||||| Sbjct 34026295 TTAGCAAAGAAGTGGTG---GTTTCGCAGCATCCAGTTCAGGTCTCCTACGCCAAACACA 34026239 Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226 ||||| || || | || || ||| |||| || ||||| | || ||||| | ||| || Sbjct 34026238 CAGACAGAGCGAACATGAACTCCGCTGCATGGTGGGTAGGGTGCACCTTTAGACACATCT 34026179 Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286 |||||| ||||||||||||| ||||||||||| | || | ||| || || ||| || Sbjct 34026178 CCTTCGAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATATCAGAAACGTCATAC 34026119 Query 160287 TTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAG 160345 || | ||| || | ||| ||||| || ||| | || || | ||| | || ||||| || Sbjct 34026118 TTCT-CATTAGAAGAAACAGCACCTGGGACGTCAGGGATTCTCTGAATTGTTGCCCATAG 34026060 Query 160346 GTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTC 160405 || || || |||||||| ||||| || | ||| || || || | |||| || | Sbjct 34026059 GTACTCATCAGGGCTGTAAGTGTCTTTTGCCCACTCAATAAATTTGAGGATTTTGCTATT 34026000 Query 160406 CCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATAT 160465 | | || || | |||| | || ||||| || || || || || || || Sbjct 34025999 TTCTAATATGTATTCTACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAAAAT 34025940 Query 160466 CG--GTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 | |||| | | ||| || | ||| || ||| ||||| ||| || | Sbjct 34025939 TGGAGTATTG--AGAGGTGGTAGTTGTTTATCTATACCTGTGTTTTTCACTTTACCATCA 34025882 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583 || | | | | | || |||||||| || || | ||||| ||| || || Sbjct 34025881 ACAATCTCATAGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCAT-TTTTCTGTTTCC 34025823 Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643 | ||||| |||| | || | ||| | | || || || || |||| ||||| | Sbjct 34025822 AAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTTTATA 34025763 Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 |||||||| | || || | |||||| | ||| ||||| || | || | ||| Sbjct 34025762 GGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAACTTCTTCTATAGAGG 34025703 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 || |||||||||||||||||||||| || | |||||| ||||| || || || ||||| Sbjct 34025702 TCTTTCATGCAATTAATATCTGCCTGTACCCTGCTCCATGAAGCATATACAACACTCTCT 34025643 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 | | |||| | |||||| ||||| ||||| || || ||||| ||| | | | || Sbjct 34025642 AACTGGCTGGATATAAAGACATTATCAAAACAGGAGACTATTCCTTTCACAG-CTGTAAA 34025584 Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 || | || | | |||| || || || | |||||| | |||||||| || ||||| Sbjct 34025583 AAAAGATTCTGGAGATTTTCTATCAACATGGATGCAATAAAAATTCTGAGGAGCATAGAT 34025524 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 | || || | ||| || | |||||| || || |||| | ||| || ||||| || || Sbjct 34025523 TGATCTCAGAAGCCTGTCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGCAAT 34025464 Query 160943 CGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAA 161002 ||||| || | || || | || || | | | | ||| || | | ||||| | || Sbjct 34025463 TGGAAATTCTGCTTCTTCACTGCTGAGAGGTTCCATAATGTATTTCCTCATCTTGGTGAA 34025404 Query 161003 ATAATCACAATCCCGCGTCATGTTGATATA 161032 | | |||| || |||||||||||||| Sbjct 34025403 AGAGGCACAGTCTGTTGTCATGTTGATATA 34025374 >seq6870 Length=19584067 Score = 226 bits (250), Expect = 3e-54 Identities = 603/907 (66%), Gaps = 22/907 (2%) Strand=Plus/Plus Query 160062 TCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGG 160121 || ||||| |||| ||| |||| || || |||||| || || || | ||| ||| Sbjct 5962605 TCGAGACACTGGATGGCCGCATCGTCTACTTCGGGGTCGAACTTGTTGGCCAGCAGTTGG 5962664 Query 160122 TGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATG 160181 | | | | || |||||| |||||| |||| |||| | ||||||||| || | Sbjct 5962665 CGC---TGCCGCAGCATCCAGGCCACGTCCCCGGCCCCGTAGACGCAGACGCTGCGCTGG 5962721 Query 160182 TGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT--CACCTTCGTAGTACT 160239 |||| |||| |||||||| | ||||| || | ||| | || || ||||| Sbjct 5962722 AAGCGGCCGGTGCAGGGCGGGTAGGGCGCTCCG--CGGCTCGTGTCGCCGTCCAGGTACT 5962779 Query 160240 GCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGG 160299 ||||||| || | | || | ||| | ||||||||| || | | | |||| | | | Sbjct 5962780 GCCACTTGACCAGGCGGGGCAGCGCGTTCATGTCGGACGTCTGGAACTTGTCGTTGTGCG 5962839 Query 160300 GAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGC 160359 | ||||| ||||| ||||||||| || | || |||||||||| ||| |||||||||| Sbjct 5962840 GCACGGCGCCGGGCACGCCGGGCGCGCGGTTCAGCGTGGCCCACACGTGCTCGTCGGGGC 5962899 Query 160360 TGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAAC-CTGTCCCGCAGAACGTGA 160418 |||| |||||||| | ||| || | ||| | ||| | |||| ||| ||||| Sbjct 5962900 TGTAGGTGTCCTTGGCCCACTCGAGGAA-GCGCCGCGCCGCGGGGTCCTCCAGCACGTGC 5962958 Query 160419 GTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTATGGGTATA 160478 ||| ||| | || | | | ||| |||||||| | ||| ||||| ||| | Sbjct 5962959 CGCACGAAGGCCCGCGTGGCCGCGATGTAGGCGCTGCCCGTGAACATCGGCGAGGGCAGC 5963018 Query 160479 GGCGGCGTGTCTTTGTCC-TGACCGGTGTTAGACACCACTCCTTTCACCAGCGCGTGTCG 160537 |||| || | || ||| || || ||| || | | | | ||| ||| ||| || Sbjct 5963019 GGCGACGGGGGCTTCTCCGTGGCC-GTGCGGGAGATGAAGCTCTCCAC--GCG-GTGCCG 5963074 Query 160538 CTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGT-TCCGTCTCTAGACTGTTGGCAC 160596 | |||||| | || ||||| | || | || | |||| ||| | ||||| | Sbjct 5963075 GTACTTCCAGCGCTCCTGCTTGTAGGCTGTC-GGCTTCTCCGACTCCATGCTGTTCTGCC 5963133 Query 160597 CGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTAC 160656 | | ||| | |||| ||| ||||| ||| ||||||| || |||||||| | Sbjct 5963134 CCTGCAGCACTCGCAGCGCGCGGACCATCTCCGCGTTGGTCTTGATGGGGAAGTCGGTGC 5963193 Query 160657 CGCACAAGTTTATCACGTACTTCCATTTC---GCGCTCAGGTCGTGCAGGTCCCTCATGC 160713 | ||| ||| | ||||| ||| | | |||| | ||||||||| ||||| Sbjct 5963194 CACACGTGTTGAGGACGTAGCGCCAGGGCACGGGGCTC---TGCAGCAGGTCCCGCATGC 5963250 Query 160714 AATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGG 160773 | || | || ||||||| ||| |||||| |||||||| ||| |||| || |||| Sbjct 5963251 AGTTGAGGTCGGCCTGCAGCCGGGACCAGGAGGCGTACACCACGCTCTCCAGGCGGCTGG 5963310 Query 160774 CCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCTTAT 160833 |||| |||||||| ||| || | |||| || ||| ||| | ||| Sbjct 5963311 CCACGAAGACGTTGGGGAAGCAGGCGGCGATGGCCCGCACGGCCTGCTGGAAGGCGGCGG 5963370 Query 160834 CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCA 160893 ||||| | ||||||||| ||||| || | |||||| || ||||||| || | || | Sbjct 5963371 GAGCCTTGCCGTCCACGTGGACGCAGTAGACGTTCTGCGGGGCGTAGAGAGCGCGCAGGA 5963430 Query 160894 ACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGG 160953 || |||||||||||| ||||| || ||||| || || |||||||| || || || |||| Sbjct 5963431 GCCGCTCGAACATCTCGATCTTGTGGTGGATGACCATGGAGTAGGCGATGGGGAAGTCGG 5963490 Query 160954 TCTCCTC 160960 |||||| Sbjct 5963491 CCTCCTC 5963497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575550416001360