Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_020839.1 Length=39573 Score E Sequences producing significant alignments: (Bits) Value seq139399 116 9e-22 >seq139399 Length=451 Score = 116 bits (128), Expect = 9e-22 Identities = 223/328 (68%), Gaps = 3/328 (1%) Strand=Plus/Minus Query 14078 CTTGGAGCCGTAGGCCATTTGCCAGAACCCGAAGCCGACATTGGCGCGGGCATCCGTGCC 14137 |||||| | ||||||| |||||| | || ||||||| ||| |||| |||| | || Sbjct 340 CTTGGACGCATAGGCCAGTTGCCACAGGCCATAGCCGACGTTGCTGCGGCCATCTGCACC 281 Query 14138 ATAGAGGAATTCCTTGTTCATGAAGACGTGGTCATCATCGAGCTTGGTCTTCGAGACGAA 14197 ||| ||| || ||| ||||||||| ||| || || | ||| | | ||| Sbjct 280 CCAGACGAACTCGTTGCGGTTGAAGACGTTGTCGTCGGTCAGGCTCGTCCTGGCCTGGAA 221 Query 14198 CTGGAAGTCCCGGCGCTTCTGCAGGATGATCGGCTTGAGCGCCCGCGTGGTGTCGAGCAG 14257 | || ||||| ||| |||||||||||||| | | || ||||| | ||| Sbjct 220 GGCGTAGGGGCGGCGACGCTGGTAGATGATCGGCTTGATCACTTTGGTCGTGTCCACCAG 161 Query 14258 GAACCAGGGCGTCCCCGTGCCGCCACCGGTATTCGAGACGGTGACAGTCTTCCCGTCCTC 14317 |||||||| | ||||||||||| | || ||| |||| ||| ||| || Sbjct 160 GAACCAGGCTGCGCCCGTGCCGCCTTGGAAGTTGCTCACGCTGACTTCCTTACCGGGCTG 101 Query 14318 GTCGAGCACGGGGTGATCGGTGTCGAAGAAGTTCTGACCGTCATAGCACTCGGTCGCGAA 14377 ||| | |||||||| ||||||||||||| ||| ||||| ||||| || ||||| Sbjct 100 TCCGA---CAGGGTGATCCGTGTCGAAGAAGTACTGGCCGTCGAAGCACCGCGTGGCGAA 44 Query 14378 GCCAAGCTTCAGGAGCTCGAACACGAGC 14405 ||| || ||||||| |||| |||||| Sbjct 43 GCCCGCCTGCAGGAGCGCGAAGACGAGC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126164532103620