Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_020840.1 Length=38987 Score E Sequences producing significant alignments: (Bits) Value seq188449 89.7 1e-13 >seq188449 Length=255 Score = 89.7 bits (98), Expect = 1e-13 Identities = 166/238 (70%), Gaps = 8/238 (3%) Strand=Plus/Plus Query 11652 TGGCGCGCTGACCTATTCGAGCTCATCAGGCAGACCCCAGAGCTGGACTGGCTCCTCCTC 11711 |||||||| ||||| |||| |||||| | | || || | ||||| ||| | || || Sbjct 13 TGGCGCGCCGACCTCTTCGCCCTCATCCGCGACACACCCAATCTGGATTGGTTGCTGCTG 72 Query 11712 ACAAAGCGCGTGGGCAATGTGTCCAGCATGCTG-CCAGAGGACTGGGGGCACGGCTGG-- 11768 || |||||| | ||||| ||| || ||| || ||| | || | ||||| Sbjct 73 ACCAAGCGCATCGGCAACGTGCCCGCGATGGTGGCCATCATCCCCGG---ATGGCTGCCT 129 Query 11769 GACCACGTCTGGCTGGGCATCACCGTAGTGAACCAGGATGAAGCTGACCGCGACATCCCT 11828 ||| |||| |||||||| || | |||||| || || |||||||||||||| Sbjct 130 GACAACGTTTGGCTGGGTGCGACGATCACCAACCAGAGCGAGGCCGACCGCGACATCCCG 189 Query 11829 AAGCTGGAGGCCACACCGGC-CGCGGTGCGCTTCCTGAGCGTGGAGCCCATGCTGGGT 11885 |||||| |||| || || ||| ||||||||||| | |||||||| |||||||| Sbjct 190 AAGCTGCTGGCCTTGCCTGCGCGC-GTGCGCTTCCTCTCCATGGAGCCCCTGCTGGGT 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124294482380268