Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_020850.1 Length=38374 Score E Sequences producing significant alignments: (Bits) Value seq20500 118 3e-22 >seq20500 Length=13099 Score = 118 bits (130), Expect = 3e-22 Identities = 282/419 (67%), Gaps = 17/419 (4%) Strand=Plus/Minus Query 30279 GTATGATCAACCTTCTGCTTATTCGTGTAGATATCGCCAACCTCTTTCGCGGCCTGTTCC 30338 || || || |||||||| |||||| || |||||| ||||||||||||||| || Sbjct 6067 GTGTGCTCTACCTTCTGTCGATTCGTATACGCATCGCCGCACTCTTTCGCGGCCTGCTCG 6008 Query 30339 ATTATCTCTTTTGTGAGCGGATAGTTTCTCTTGAGCTCTGCGTTAGCG--GCCATGCGGT 30396 | |||| | | | |||||| || || |||| || ||| |||||||| | Sbjct 6007 ACGATCTGAGCAGCCAATGCGTAGTTTTTCATGGTTTCTG--TTTGCGTCGCCATGCGAT 5950 Query 30397 CAAGAACGCGCAAACGATAGGCGCGGTTAGCAATTGGAATATCGTTAATTTCGTTATTGA 30456 ||||||||||||| || ||||| |||||| || ||||| || |||||| | |||| Sbjct 5949 CAAGAACGCGCAACCGGTAGGCCTTGTTAGCGATCGGAATGTCTGAAATTTCAGTCTTGA 5890 Query 30457 ATCGCTCTCGGCATTCGTAAAATAACTCTTTCCAtttttttGCAAGTTTCTGTTGGGATG 30516 |||| ||||| || || | ||| ||| || || || || | || Sbjct 5889 ATCGTTCTCGCGTCGTGTGGAACAGGTCTACCCACTTCTTGGCCAG---CGATT---TAC 5836 Query 30517 CGC---CCTTTGTCGGATCGTAACTTTCGACCTGCTGGCGAGTAATCGTGATACCAAAC- 30572 ||| |||||||||| |||| | ||| |||||||| || || || | | |||||| Sbjct 5835 CGCTAACCTTTGTCGGGTCGTGAGATTCAACCTGCTGACGCGTGATTTTTAGCCCAAACT 5776 Query 30573 CTTTCCTTGAACGCA-TTAACAACCATTGTTGGAGTGTCGTAACACGCGTTGGCTTGGAT 30631 |||| ||| ||| | | || |||| ||| || ||||| | ||||| | || || Sbjct 5775 CTTT--TTGGACGGACTCCACTACCAGTGTAGGGGTGTCAAAGCACGCAAGCGACTGAAT 5718 Query 30632 AATAAAGCATTTTTGTTCAGTGGTTAGTGCTGCCATAAATCACCATCTAGCCATTACAG 30690 || ||| |||| || | ||| ||| |||||||||||||||| ||| ||||| Sbjct 5717 GATGAAGGCTTTTACATCTGGTTTTAATGCAGCCATAAATCACCATCCGTCCAATACAG 5659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122338269956352