Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq215570 87.8 5e-13 >seq215570 Length=313 Score = 87.8 bits (96), Expect = 5e-13 Identities = 124/171 (73%), Gaps = 4/171 (2%) Strand=Plus/Plus Query 19910 ATAATTAACATTTCCATTTGCGAAGGGCAAGAGCCTTACGAGTAGGT-CTGCCTTTTTTA 19968 || ||||||| |||||||||||||| ||||||| || | |||||| || | || | Sbjct 63 ATTATTAACAGTTCCATTTGCGAAGAGCAAGAGTTTTTCTTGTAGGTTCTCCATTAGGTT 122 Query 19969 TCTTT-CATTGGTCCTTTTACCCCTGACATACGGGCGCAAAATGATCTTTTGCGAGGACC 20027 |||| || || ||||||||||||||||| | || ||||| || | || | || ||| Sbjct 123 TCTTAGCA--GGGCCTTTTACCCCTGACATTCTTGCACAAAAAGAACGCTTTCTAGCACC 180 Query 20028 TCCACCGGGTTGCGGTGCTTTTAGGTTAGAGCCTGTAGCTCTGTTGTACTT 20078 ||| ||||| | || ||||| ||| ||||||||| | || || || Sbjct 181 TCCTTGAGGTTGGGCTGGTTTTAAATTACTTCCTGTAGCTTTATTATATTT 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143307718304724