Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_021561.1 Length=37324 Score E Sequences producing significant alignments: (Bits) Value seq20500 136 9e-28 >seq20500 Length=13099 Score = 136 bits (150), Expect = 9e-28 Identities = 264/389 (68%), Gaps = 18/389 (5%) Strand=Plus/Plus Query 24091 GGGCAGGTAACGGGTTTTCGTGCAGGGCATATGGACCATTCGCCGGAGAATTTCACAGGC 24150 || |||||||| || ||||| || ||||| ||||| ||| || | || ||| Sbjct 6592 GGCCAGGTAACTGGATTTCGAGCCGGGCACATGGA------GCC--AGGCTGGCA-AGGT 6642 Query 24151 GGCTTAATCATTGACGACCCCGTAAAGCCCGAAGACGCTTATTCCGAGGTTATGCGTGAG 24210 | | | || || ||||| ||||| || || |||||||| || ||| | | || || Sbjct 6643 GCTCTGGTTATAGATGACCCAGTAAAACCTGACGACGCTTACTCTGAGATCGTCCGCGAT 6702 Query 24211 GGTGTGAATAACAACTACAACGAGACAATAGCCTCGCGTGTAGCCGTGGAGAATGTACCT 24270 || || |||||| || ||||||||||| || || | || | |||| | || Sbjct 6703 GGCGTAAATAACCGCTTTAACGAGACAATCAAATCACGACTGGCGATCGAGACTACGCCG 6762 Query 24271 ATCATCGTTATTATGCAGCGCATTCACTGGAATGATTTGTCTGGGTACTTATTACGCGGC 24330 || || || |||||||||||||| |||| | ||| || || || | | ||||| Sbjct 6763 ATGATTGTCATTATGCAGCGCATCCACTACCACGATCTGAGCGGTTATCTTCTGCGCGGA 6822 Query 24331 GGGAGTGGTGAGAAGTGGCATCATTTAAACCTTCCTGTCATTATCGACAACGCAAAACCA 24390 || ||||||||||| ||||||||| | ||| | || || |||||||||||| | || Sbjct 6823 GGCAGTGGTGAGAAATGGCATCATCTTAACTTGCCGGTGATTATCGACAACAGTCAGTCA 6882 Query 24391 TATCCCG---------CAGAATACACTCACGGCATACCATACGAGCACGGTTTAGAGGAT 24441 || | | ||||| |||| |||| |||||| || ||||| || ||| Sbjct 6883 TACGCTGCGCAGTATCCAGAAAACACCCACGCTATACCAATTGACCACGGATTGCCTGAT 6942 Query 24442 GGTTGGTTGTGGCCTTTCAAGCACAATGA 24470 || ||| ||||||| ||||| ||||| || Sbjct 6943 GGCTGGCTGTGGCCATTCAAACACAACGA 6971 Score = 86.0 bits (94), Expect = 1e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24793 GCTGATGCCATTGTTATTGAGCAAAACCAAGGCGGTGATATGTGCGAGACTACGCTGCGC 24852 || ||||| || || || ||| |||||| || ||||| ||| ||| || || ||| Sbjct 7306 GCAGATGCGATCGTCATAGAGACAAACCAGGGTGGTGACATGGCGGAGGAAACACTCCGC 7365 Query 24853 AACGCTGGTTATCAAGGGCGCATTATTCGAGTTACAGCCCGTAAAGGTAAGGCGGTCCGA 24912 || || || | | ||||||||||||| |||||| ||| |||| || ||| | |||| Sbjct 7366 AATGCAGGATTTAAAGGGCGCATTATCCGAGTTCATGCCAGTAAGGGGAAGTATGCCCGA 7425 Query 24913 GCTGAACCCGTAGCGGCGCTGTATGAGCAAGG 24944 || ||||| || | || || || |||||||| Sbjct 7426 GCGGAACCAATATCAGCACTTTACGAGCAAGG 7457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118987498267752