Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq23847 138 3e-28 >seq23847 Length=8263 Score = 138 bits (152), Expect = 3e-28 Identities = 352/526 (67%), Gaps = 35/526 (7%) Strand=Plus/Minus Query 24964 GTCTATTTGCCGTGCATGTTCGGTAAGGTGATTAGGTGCGAGGTGAGCATATCGACGAAC 25023 ||| |||| | ||||||||||| || || | || | ||||||||||| || |||| Sbjct 7367 GTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAAC 7308 Query 25024 CATTTCGATAGACTCCCAGCCTCCCATTTCCTGTAACACTGACAACGGGACTCCGGCTTG 25083 |||||| || |||||| || |||||||| || | | || | || || || || || Sbjct 7307 CATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCCTG 7248 Query 25084 AACCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCATCAATACCTGC 25143 ||||| |||||| ||||| || || | || |||||||| | ||||||| || || || Sbjct 7247 AACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCCGC 7188 Query 25144 ---TCGTCTCAGCGCCGCT-TTCCAGGCTGTGTTTGCGTCATACCGCATCTTCCTGACCG 25199 ||| || ||| | ||||| |||| ||| | ||| |||||| ||||| || Sbjct 7187 CCTCCGTTTC----CCGGTGTTCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAAC-- 7134 Query 25200 TTGGCGCTTTCGTTCCGTC------TGGTTT-GGTACAGCTTTCCTTGTAAACAAATACC 25252 || ||| || |||| | | |||| || ||| | | | | ||||| | | Sbjct 7133 -TGCCGCGGTCACTCCGCCGCCAGGTCGTTTCCGT---GCTGT-CGTATGCACAAAGA-C 7080 Query 25253 CAACGGTGA-TGATTCCCGATTTGTTTTTTCAATACGCGACATGCAGTATCATTCAGCGC 25311 || |||| || ||||| || || | |||| || || || ||||| ||||| || Sbjct 7079 GTACCGTGAGTGCTTCCCAATCTGATCACGCAATGTTCGGCACGCGGTATCGTTCAGAGC 7020 Query 25312 AACGCCAA-----TTGCGCGGTTTGATTTACTCTCTTCCGGGTTTATCCATGCCACCCGG 25366 |||||||| || | || |||| | |||| |||| |||||||||||| Sbjct 7019 AACGCCAATAGCCTTACCCGCTTTGGCGTTCTCT-----GGGTGGATCCATGCCACCTTT 6965 Query 25367 CGCTGCATATCTATTTGTTGCCATTCAAGGTTGATGATGTTCGAGCGTCTTAAGCCTGTT 25426 | ||||| || | || ||| || || | |||||| || || || | || ||| ||| Sbjct 6964 CTTTGCATGTCAACCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTT 6905 Query 25427 GCCAGTGCAAATTCAACAACAGACTTTAATGGCTCCGGACATTCAT 25472 ||||| ||||| | ||||| | | | || | ||||| ||| ||| Sbjct 6904 GCCAGGGCAAAAACGACAACGGGCCTAAACTGTTCCGG-CATGCAT 6860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132234215676684