Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq142870 179 3e-40 seq8367 132 4e-26 seq7705 105 6e-18 >seq142870 Length=314 Score = 179 bits (198), Expect = 3e-40 Identities = 212/287 (74%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 56881 GCCATTATCTGCCCGAAATTGCCCTTGTACGGTTCGTTCCAAGCGGACACTCCTTTTTGT 56940 ||||| | ||| ||||| ||||||||||| || || | ||| |||| ||| || || || Sbjct 7 GCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTGC 66 Query 56941 GGTTTCTGTAGTGCGGCCCACGGATCGTGTATGGACACCTTGAAATCAGCACGATTCGAA 57000 | ||| || || ||||| |||||||||| || || || ||||| || | || | | Sbjct 67 GCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTGA 126 Query 57001 CACGAGCGTTGCAACGCTTCGAAACTACCCGTGATCGTTTTGAGACTATCGTTGATGCCG 57060 || ||||| ||||| || | |||||| || |||| ||| || || ||||||||||| Sbjct 127 CAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATCTCTTTCAGGCTGTCGTTGATGCCA 186 Query 57061 TCGCCGCCACAGATCGGTATGAAACCGTATAAGAGATGCGACAGATTGGGCACTGGCACC 57120 | |||||| |||||||| || || ||||| | || || | ||| || || | || | | Sbjct 187 TTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGATC 246 Query 57121 TTGTCGGCTGCAAAATTCCTACCGTATACGCCCCATTCGACGAAATA 57167 |||||| | | ||||| | ||||| |||||||| ||||||||||| Sbjct 247 TTGTCGACGGTGAAATTGCGCCCGTAAACGCCCCACTCGACGAAATA 293 >seq8367 Length=9740059 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || ||| ||| Sbjct 8893218 ATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAACCCAGT 8893277 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||||||||| ||||| || ||||||||||| Sbjct 8893278 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAG 8893337 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| || | | | |||| || || ||| Sbjct 8893338 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGACGCACCCTGTCTGACTACAAC 8893397 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || || || || || ||| |||||||||| || | |||||| Sbjct 8893398 ATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGAGGGGAGGC 8893445 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || || || || || || || || ||| Sbjct 8893446 ATGCAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 8893505 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||||||||| || ||||||||||| Sbjct 8893506 GACACCATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 8893565 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| || | | | | |||| || || ||| Sbjct 8893566 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 8893625 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || || ||||| || || ||| ||||| |||| Sbjct 8893626 ATCCAGAAAGAATCCACCCTGCACCTGGTGCTGCG 8893660 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || ||||| || || ||| Sbjct 8892762 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 8892821 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || || ||||||||||| ||||| || ||||||||||| Sbjct 8892822 GACACCATTGAAAATGTGAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCCGATCAG 8892881 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||| || || || |||||||| ||| | | | |||| || || ||| Sbjct 8892882 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 8892941 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||| ||||| |||| || | |||||| Sbjct 8892942 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGAGGC 8892989 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || ||||| || || ||| Sbjct 8892990 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 8893049 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || || ||||||||||| ||||| || ||||||||||| Sbjct 8893050 GACACCATTGAAAACGTGAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCCGATCAG 8893109 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| || | | | | |||| || || ||| Sbjct 8893110 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 8893169 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||| ||||| |||| || | || ||| Sbjct 8893170 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGAGGTGGC 8893217 >seq7705 Length=13065498 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || | || ||||| || || || || || || || | | Sbjct 4578419 GATGCAGATCTTTGTGAAGACCTTGACGGGTAAGACCATCACTCTGGAGGTCGAGCCTAG 4578478 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| || ||||| || || || || || ||||| Sbjct 4578479 TGACACCATTGAGAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGATCA 4578538 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||| || || |||||||| ||| | | | |||| || || || Sbjct 4578539 GCAAAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACTCTGTCTGACTACAA 4578598 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || ||| ||||| |||| || | ||||| Sbjct 4578599 CATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGAGG 4578646 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || | || || ||| ||| Sbjct 4578192 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAACCCAGT 4578251 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || |||||||| Sbjct 4578252 GATACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAG 4578311 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | |||| || || ||| Sbjct 4578312 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACTCTGTCTGACTACAAC 4578371 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| ||||| |||| || | ||||| Sbjct 4578372 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGAGGGGAGG 4578418 Score = 98.7 bits (108), Expect = 9e-16 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || | || || || || || ||| | || || ||| ||| Sbjct 4578647 GATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACGTTGGAGGTTGAACCCAG 4578706 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || |||||||| Sbjct 4578707 TGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 4578766 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| || || |||||||| ||| | | | |||| || || || Sbjct 4578767 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACTCTGTCTGACTACAA 4578826 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||| || ||||| || || || || |||| Sbjct 4578827 CATCCAGAAGGAGTCCACTCTCCATCTTG 4578855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448596912296080