Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq139365 185 1e-41 seq201067 86.0 1e-11 >seq139365 Length=376 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35529 AACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTG 35588 ||||||||||| || |||||| || || | |||||||| || ||||| Sbjct 366 AACAGCATCTGGGCGCAGCCTTCGCCGGCATAGATCTTGGCCGGCAGCGGCGTGGTGTTC 307 Query 35589 CTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATG 35648 ||| ||||| || || || |||||||| || ||||||||||||||||||||||||||| Sbjct 306 GAGAATTCCAGCGTGACGTGGCCTTCCCATTCGGGTTCCAGCGGCGTCACGTTGACGATG 247 Query 35649 ATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATG 35708 || || |||||||||||||||||||| |||| || | | || ||| ||||||||||| Sbjct 246 ATGCCGCAGCGCGCGTAGGTGCTCTTGCCCAGGCAGATCGTCAGCACGCTGCGCGGAATG 187 Query 35709 CGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAAT 35755 ||||||||||| |||||||| ||||| ||||| ||| ||||| || Sbjct 186 CGGAAGTATTCCACCGTGCGGGCCAGCGCGAACGAGTTGGGCGGGAT 140 >seq201067 Length=213 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 35522 CTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGT 35581 || ||| || || | ||||||||| ||||| ||||| | |||||||| || Sbjct 209 CTTGAAGAAGAGGAACTGCGCCACGCCTTCACCGGCGTAGATCTTGGCCGGCAGCGGCGT 150 Query 35582 AGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTT 35641 |||||| ||| ||||| || || ||||||||||| | || || ||||||||||| || Sbjct 149 CGTGTTGGAGAATTCCAGGGTGACGTGACCTTCCCAGCCCGGCTCGAGCGGCGTCACATT 90 Query 35642 GACGATGATACCACA 35656 ||||||||||| || Sbjct 89 CACGATGATACCGCA 75 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 823529012587440