Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq201657 100 3e-16 >seq201657 Length=287 Score = 100 bits (110), Expect = 3e-16 Identities = 171/244 (70%), Gaps = 7/244 (3%) Strand=Plus/Minus Query 143897 GGCCATCTGGTGTTCTTCAAAGGCACCGACACCAACCCTGCTCTGGACTTCGTTGAAGAG 143956 ||||| ||| ||| |||| ||||||||||||| ||| || | |||| | | ||||| Sbjct 245 GGCCACCTGCTGTCGTTCACCGGCACCGACACCATCCCGGCCATCGACTACCTGGAAGAC 186 Query 143957 TATTATGGCGCGGATATCGATGAAGACTATGTCGTTGCTGGCTCTGTTGCAGCCACCGAA 144016 || ||||| || ||| || |||| || ||||| || | || |||||| Sbjct 185 ATCTACGGCGCCGACTCCGACCGCGAACTGGTCG--GC-GGCTCGGTGCCCGCGACCGAA 129 Query 144017 CACGCCGTGATGTGCATGGGCACGAAGGATGGCGAGTTCGAAACCTTCGAGCGCCTGATC 144076 ||| | || |||||| |||||| ||||| ||||| |||||||| || |||||| || Sbjct 128 CACTCGGTCATGTGCCTGGGCAGCAAGGAAGGCGAAATCGAAACCATCCGCCGCCTGGTC 69 Query 144077 TCTAAAGTCTATCCGGACGGGAT--TGTCAGTATCGTTTCTGATGCATGGGATTACTGGC 144134 | | |||||||||| ||| || |||| | | || || || | ||||| | ||||| Sbjct 68 ACGCAGGTCTATCCGGCCGGTATCGTGTCGG--TGGTGTCCGACACCTGGGACTTCTGGC 11 Query 144135 AGGT 144138 | || Sbjct 10 AAGT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510363422920560