Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq8367 154 1e-32 seq7705 150 1e-31 seq142870 114 8e-21 >seq8367 Length=9740059 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||| |||||||| | |||| ||||||||| ||||| ||||| || Sbjct 8892988 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 8892929 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| || ||||||||||| | ||||| || | || Sbjct 8892928 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGAGGA 8892869 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | ||||| || || | | || | ||| ||| ||| || Sbjct 8892868 ATGCCTTCCTTGTCTTGGATTTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAACC 8892809 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 8892808 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 8892761 Score = 145 bits (160), Expect = 5e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| | ||| |||||||| | |||| ||||||||| ||||| ||||| || Sbjct 8893216 CCACCTCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 8893157 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| | || ||||| ||||| || || |||||||| | ||||| || | || Sbjct 8893156 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 8893097 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | ||||| || ||| | | || | ||| ||| ||| || Sbjct 8893096 ATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACC 8893037 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 8893036 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 8892989 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | || |||||||| | |||| ||| ||||| ||||| ||||| || Sbjct 8893444 CCTCCCCTCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 8893385 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| | || ||||| ||||| || || |||||||| | ||||| || | || Sbjct 8893384 AGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 8893325 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || || | | || | ||| ||| || || Sbjct 8893324 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCACTGGGTTCAACC 8893265 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 8893264 TCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCATG 8893217 Score = 114 bits (126), Expect = 8e-21 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | |||| || ||||| ||||| ||||| || ||| ||||| | || Sbjct 8893658 CAGCACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTC 8893599 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| | ||||| || | || | || || ||||| Sbjct 8893598 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTC 8893539 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || || || || || || | ||| ||| ||| || |||| || ||| Sbjct 8893538 TTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATG 8893481 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || ||||| || ||||||||||||||| Sbjct 8893480 GTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATG 8893445 >seq7705 Length=13065498 Score = 150 bits (166), Expect = 1e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||| |||||||| | |||| ||||||||| ||||| ||||| || Sbjct 4578646 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578587 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || ||||| |||| ||||| ||||| || || |||||||| | |||||| || | || Sbjct 4578586 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGGGGA 4578527 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||||||||||| | || || ||||| || || || | ||| | | ||||| Sbjct 4578526 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGAC--ATTCTCAATGGTGTCACTAGGCTCGA 4578469 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || |||||||| ||||| | |||||| |||||||||||||| Sbjct 4578468 CCTCCAGAGTGATGGTCTTACCCGTCAAGGTCTTCACAAAGATCTGCAT 4578420 Score = 140 bits (154), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||| |||||||| | |||| ||||||||| ||||| ||||| || Sbjct 4578418 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578359 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || ||||| |||| ||||| ||||| || || |||||||| | ||||| || | || Sbjct 4578358 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 4578299 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||||||||||| | || || ||||| || || || | ||| ||| || | Sbjct 4578298 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCGATGGTATCACTGGGTTCCA 4578241 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||| |||||||| || || | |||||| || |||||||||||| Sbjct 4578240 CCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATG 4578191 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 || || ||||||| | |||||| || || | ||| ||||||||| ||||| ||||| Sbjct 4578877 TTACCACCCCTCAGGCGCAGGACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCA 4578818 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || || ||||| |||| ||||| ||||| || || |||||||| | ||||| || | Sbjct 4578817 GACAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGG 4578758 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | ||||||||||| | || || || ||| | || | ||| ||| || Sbjct 4578757 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGTTCA 4578698 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || |||||||| || || | |||||| |||||||||||||| Sbjct 4578697 ACCTCCAACGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4578648 >seq142870 Length=314 Score = 114 bits (126), Expect = 8e-21 Identities = 210/303 (69%), Gaps = 6/303 (2%) Strand=Plus/Plus Query 6229 GCCATCAGCTGGCCAAAGTTACCCTTGTACTCTTCGTTGTACGCCTCAACACCTTTCTGT 6288 |||||||||||||| ||||| |||||||| || | | || || || ||||| Sbjct 7 GCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTGC 66 Query 6289 GGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTTACCTTGAAGTCATCGCGACCAGCG 6348 | |||||||| |||||| | ||||| || || |||||||| ||||| || Sbjct 67 GCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTGA 126 Query 6349 CAGGATTTCTGTAGCGCCTCAAAG--GAATTGGGAATCTGCTTGAGGGCGTCGTTTATGC 6406 ||||| ||| | |||| || | || | |||| || ||| |||||| |||| Sbjct 127 CAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCG--ATCTCTTTCAGGCTGTCGTTGATGC 184 Query 6407 CGCTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTCAGATTAGGTATTGGTA 6466 | | || || || || || || || |||||||||||||| ||||| || | || | Sbjct 185 CATTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGA 244 Query 6467 CCTTGTCAATGG-GAAACTGTCTGCCATACACTCCCCACTCCACGAAATACGCACCGACG 6525 |||||| | || |||| || | || || || |||||||| |||||||| | ||||||| Sbjct 245 TCTTGTCGACGGTGAAATTG-CGCCCGTAAACGCCCCACTCGACGAAATAAGAACCGACG 303 Query 6526 ACT 6528 ||| Sbjct 304 ACT 306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324774737746034