Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_022750.1 Length=33628 Score E Sequences producing significant alignments: (Bits) Value seq201653 104 5e-18 seq140712 100 6e-17 seq145387 89.7 1e-13 seq193866 87.8 4e-13 >seq201653 Length=261 Score = 104 bits (114), Expect = 5e-18 Identities = 161/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 2220 GGGATCCAGAAAATCTCATCGACGTACAGGTCGCCGTTATGGCTCTGTGCGGTGTTGGAG 2279 |||||||||||| || || | ||||| | ||| ||| |||||||||||||||| Sbjct 240 GGGATCCAGAAATATTCGTCCAGATACAGATTGCCTGGCCGGCCCTGTGCGGTGTTGGAG 181 Query 2280 TTGGTGCCGAGAAAAATCAGTTTTGCACCGTTATTGCCCAGGACAATCGGGTCACCGGTC 2339 ||||||||||||||| || || || ||| ||| ||||| || | || ||| | Sbjct 180 TTGGTGCCGAGAAAATGCAATTCAGCCGCGT--TTG-GCAGGATGATGGTTTCCCCGCGC 124 Query 2340 AGGTCAACGTCAACCAGCCGGGCAAAGGCGATGATGTATTCGCGGAACACATACGCCTGC 2399 || || || |||||| | ||||||||| ||||||| | |||| | ||||||| Sbjct 123 AGCTCCACATCAACCTCTTGCGCAAAGGCGGTGATGTAGTTTTTGAACTGGTGCGCCTGC 64 Query 2400 GTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGTTTTCAGGGCG 2447 | || ||| || | ||| ||||| ||| | || || | ||||||| Sbjct 63 GCCTTGGAGGCGGAAACAAACATCTGATTACGCCCCGTGTCCAGGGCG 16 >seq140712 Length=381 Score = 100 bits (110), Expect = 6e-17 Identities = 193/282 (68%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 874 TAACGCTTTTCCAGAAACGCATTACCGAACACCAGAAAATCCAGCACAAAGCGGCTGAAA 933 |||||| |||| ||| || |||||||||| ||||||| || || ||||||||||| Sbjct 36 TAACGCGACTCCATAAAGCTGTTGCCGAACACCATAAAATCCTGCGCATAGCGGCTGAAA 95 Query 934 TCCTGCTGGGAAAGCCACGGATGCGGGATAAATGTCGAGGCCAGAATATTACGTTTGA-C 992 ||||||| || ||| | | || || | || | | | || || || || | | Sbjct 96 TCCTGCTTTGACAGCAGCCGGTGGGGCTTGAACATGCTCACTAAGATGTTGCGCTTCATC 155 Query 993 GTAAATCGGGGAGCTGTGATGCACGGCAGCACGCAGGCTTTTTGCCAGACCGGTAAAGCT 1052 || ||||| || ||||||||||| || || || | | || ||||| ||| | || Sbjct 156 GT-GATCGGTGAACTGTGATGCACCGCCGCGCGGAACGTCTTCGCCAGGCCGTTGAAAGA 214 Query 1053 GACCGGTGGCTCATACCATCTGCCGTTACTGATGCACTCGACGTAATCCAGAATGTCACG 1112 || || ||||||||||| | || | |||||| | |||||||| || || || Sbjct 215 GATTGGCGGCTCATACCAGCGATCGACGACGCAGCACTCCAGATAATCCAGTATTTCGCG 274 Query 1113 GCGATCGAGTACCGGCACCGGCTCACCAAAGGTGAATGCCTC 1154 ||||| || | ||| | ||| || || ||||| || ||||| Sbjct 275 CCGATCCAGCATCGGGATCGGGTCGCCGAAGGTAAACGCCTC 316 >seq145387 Length=359 Score = 89.7 bits (98), Expect = 1e-13 Identities = 186/277 (67%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 4587 TCGGCTGGCTGCAGAAATACCGCAATGAAGCACCGGCGCGCGTGATGAGCAAGGTCACTG 4646 |||||||| |||||||| |||||| | || || | || |||||| ||||| | Sbjct 81 TCGGCTGGTTGCAGAAAGTCCGCAAGGGTGCGCCAGAGCAGGTGATGGATAAGGTGCTGG 140 Query 4647 ACGAGGAAGGGCACACCACCTCTGAGGTTATCCGCGTGGGTAAGGGCGGTGATTATGCCA 4706 |||||| || | || || || ||| | || | | ||||| ||| || Sbjct 141 GCGAGGACGGCAGCGTTGTGTCGGAAAAAATTCGCATCGGCACCGATGGTGACTATCACA 200 Query 4707 GCCTTGACGCACTGGTGATGGATGCGACCAACAACCTGATTGAGCCGTGGTATCAGGAAG 4766 ||| || || |||||||||||||| ||| | ||||| | | ||||||||||| | Sbjct 201 ACCTGGATGCGCTGGTGATGGATGCCGTCAATGAGCTGATCGCCGCTTGGTATCAGGATG 260 Query 4767 ACCCTGACCTTGTGGTGATTGTGGGGCGTCAGCTACTGGCGGACAAGTATTTCCCCATCG 4826 || | || || || | |||| || ||| || |||||||||| |||||||| ||| Sbjct 261 ACACCGAACTGGTCGCCGTTGTTGGTCGTTCCCTGTTGGCGGACAAATATTTCCCACTCG 320 Query 4827 TTAACAAGGAGCAGGACAACAGCGAGATGCTGGCCGC 4863 | ||| |||| ||| || | |||| ||||||| Sbjct 321 TCAACCAGGAACAGCCAAATACCGAGTCTTTGGCCGC 357 >seq193866 Length=203 Score = 87.8 bits (96), Expect = 4e-13 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1836 CAGCGTTGCAGCTCCTCGAACGGGAACACCGACGCCTTGTCGTCAACAAATTCACACATG 1895 ||||| |||| || | | |||||| || |||| | ||||| | || | |||||| Sbjct 202 CAGCGCTGCATTTCGCCCATCGGGAAGACGGACGATGTATCGTCGATGAAGTTGCACATG 143 Query 1896 AACAGGTTTTTAAAATCGTCGGCGCTGTTTTCGCGTTTGAGCTGCTCAATGTCGAACAGC 1955 |||||||| | |||||| || |||||||||| | |||| || | ||| ||||| Sbjct 142 AACAGGTTGTCAAAATCTTCATCGCTGTTTTCCTCTCGCAGCTCGTCGAGGTCAAACAGG 83 Query 1956 GTGCAGCCGCCTTTCAGGGCGTCCTCAATGGTGACAATCTGCCGCCACTGGCCGTCCGCA 2015 ||||||||| || || || |||||| |||| ||||| || | || |||| | Sbjct 82 TCGCAGCCGCCGCGCAACGCATCTTCAATGTTGACGATCTGGCGGAATTGCTTGTCCTCG 23 Query 2016 CAGAGAAGCCCACCGGCAAGG 2036 ||||| | || ||||| ||| Sbjct 22 CAGAGCACACCGCCGGCCAGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107192781923880