Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq7705 138 9e-28 seq8367 136 3e-27 seq142870 120 2e-22 >seq7705 Length=13065498 Score = 138 bits (152), Expect = 9e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| |||||||||| || || ||||| || || || ||||| || || | Sbjct 4578646 CCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578587 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||||||| | |||| ||||||||||| || ||| Sbjct 4578586 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGGGGA 4578527 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || ||| || | |||||| | || | |||||| | | || || Sbjct 4578526 ATGCCCTCCTTGTCCTG-AATCTTGGCCTTGACATTCTCAATGGTGTCACTAGGCTCGAC 4578468 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || || ||||| || ||||| |||||||| Sbjct 4578467 CTCCAGAGTGATGGTCTTACCCGTCAAGGTCTTCACAAAGATCTGCAT 4578420 >seq8367 Length=9740059 Score = 136 bits (150), Expect = 3e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||||||||| || || ||||||||||| || ||||| || || | | |||||| Sbjct 8893660 CGCAGCACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCG 8893601 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||||||| | |||| || |||||||| || ||||| || |||||| Sbjct 8893600 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTG 8893541 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || || ||| | || | |||||| | || || |||||||| || Sbjct 8893540 TCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATG 8893481 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | |||||| ||||| |||||||| Sbjct 8893480 GTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 8893446 >seq142870 Length=314 Score = 120 bits (132), Expect = 2e-22 Identities = 200/289 (69%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 45113 CTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTTCCTATGAACCGCGTGCCAGTGC 45172 |||||||||| || ||||| || || ||||||||||| | | || | || | || Sbjct 295 CTTATTTCGTCGAGTGGGGCGTTTACGGGCGCAATTTCACCGTCGACAAGATCCCGGCGC 236 Query 45173 CGAACCTTACGCATTTGTTATACGGTTTTATTCCTATATGCGGTGGCGATGGCATTAATG 45232 ||||| || || || | ||||| ||||| || || ||||| ||| ||||||| || | Sbjct 235 AAAACCTGACCCACCTGCTGTACGGCTTTATCCCGATCTGCGGCGGCAATGGCATCAACG 176 Query 45233 ACAGTCTTAAAACGATTACAGGCAGTTTTGAAGCGTTGCAAAAATCGTGCGCCGGCCGCT 45292 |||| || ||| ||| ||||||||| | || ||||| || || |||||| Sbjct 175 ACAGCCTGAAAGAGATCGAAGGCAGTTTCCAGGCCTTGCAGCGCTCCTGTCAGGGCCGCG 116 Query 45293 CAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGCTGTGCAAAAACCACAAAAAGGCG 45352 || |||||||| || ||||| || | ||||| |||||||| | || || |||| Sbjct 115 AGGACTTCAAAGTCTCGATCCACGATCCGTTCGCCGCGCTGCAAAAAGCGCAGAAGGGCG 56 Query 45353 TTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGGACAAATCATGGC 45401 | | || ||| | || || || || ||||| || || || | ||||| Sbjct 55 TGACCGCCTGGGATGACCCCTACAAGGGCAACTTCGGCCAGCTGATGGC 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384133344841326