Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq33737 98.7 7e-16 seq145555 91.5 1e-13 >seq33737 Length=870 Score = 98.7 bits (108), Expect = 7e-16 Identities = 117/156 (75%), Gaps = 7/156 (4%) Strand=Plus/Plus Query 94968 AGGGGTCGCCCG-GTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGACTTGCCCG 95026 ||| |||| || ||| |||||||| | | ||| | |||||| | |||||||||| Sbjct 403 AGGCGTCGGCCTTGTACAGCAGCGACAGGATCATGGCGTTGATCCCGACCGACTTGCCCG 462 Query 95027 ATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTGGCCAGGTTCAGGGAGACGTCC- 95085 ||||||| | ||| ||||||||||| ||||||||||||||||||| || || || Sbjct 463 ATCCGGTGGTGCCCGCCACCAGCAGGTGCGGCATCTTGGCCAGGT---CGGCCACCACCG 519 Query 95086 --TTACCCTCGACGTCCTTGCCCACTGCCACGGTCA 95119 || || ||| ||||||||||| |||| ||||| Sbjct 520 GGTTGCCGGCGATGTCCTTGCCCAGCGCCATGGTCA 555 >seq145555 Length=361 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/184 (71%), Gaps = 3/184 (2%) Strand=Plus/Plus Query 94582 CGCGAGGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTC 94641 |||| ||| | |||| |||||| ||||| || | ||| |||||| ||| ||||| || Sbjct 29 CGCGTGGGGATGTTGGCCTTGATCAGGCCGGTGATCACGTCCACGCTGGGGCGCTGGGTG 88 Query 94642 GCCAGGACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCC 94701 ||||||| || || ||||||||||| || |||||||| || | ||| | || || Sbjct 89 GCCAGGATCAGGTGGATGCCGGCCGCGCGGGCCTTCTGGGCCAGGCGCGCGATCAGCTCC 148 Query 94702 TCAACCTCTTTCTTGTAGCCACCCATCATGAGGTCCGCGAGTTCATCCACCACTACCACG 94761 || | | |||||| | | ||||||| ||||| || || || || | || | ||| Sbjct 149 TCGATC---TTCTTGCCGACCACCATCATCAGGTCGGCCAGCTCGTCGATGACGATGACG 205 Query 94762 ATGT 94765 |||| Sbjct 206 ATGT 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339162865871648