Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_024365.1 Length=51090 Score E Sequences producing significant alignments: (Bits) Value seq20500 333 9e-87 >seq20500 Length=13099 Score = 333 bits (368), Expect = 9e-87 Identities = 533/756 (71%), Gaps = 12/756 (2%) Strand=Plus/Plus Query 39875 ATCCTTGCCGATACCGGCAGCATCCACAACGAAGACCATGCCCATTTGATCGATGCTGAC 39934 ||| ||| |||| |||||||| | ||| |||||| | || | || || || Sbjct 5135 ATCATTGACGATGCCGGCAGCCTGTTTAACCCAGACCACGGACACCTTGCAGACGCCGAT 5194 Query 39935 ATCTGCATCATGTGGGCCTCATCTGCCTTCACGAAGCAAGGTCGCACAGTGCTGGGCCAA 39994 | || | |||||||| || || || || |||| |||| ||| ||||| ||||| Sbjct 5195 CTGCGCTTTATGTGGGCATCGTCCGCGTTTGAGAAGAAAGGGCGCCATGTGCTCGGCCAG 5254 Query 39995 GCCGAACAGGTTGCGTTCCGTGCCGGTGGTTGGCAGAAGGCCCGGATGGAGCAGCAGATG 40054 || ||| |||| ||| | || || || || |||||||||||||||||||| ||||||||| Sbjct 5255 GCTGAAGAGGTGGCGATGCGCGCAGGCGGCTGGCAGAAGGCCCGGATGGAACAGCAGATG 5314 Query 40055 CGTGACTGGTTCGGCTGCGTACCGAGCTACATCATCACCCTGGCTGCCGATTACTGCTCA 40114 | ||| |||||||| || |||| | ||| ||||| || |||||||| |||||||| Sbjct 5315 CATGAGTGGTTCGGTGATGTGCCGAAATTCATTATCACGCTCGCTGCCGACTACTGCTCG 5374 Query 40115 CAGTGCAGCGATGCGGACTTCTGTGCACTGGTCGAGCATGAGCTCTACCACATCGCCCAG 40174 ||||| || || || ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct 5375 CAGTGTTCAGACGCCGAGTTCTGCGCCCTGGTCGAGCATGAGCTTTACCACATCGCACAG 5434 Query 40175 G---CAGTCGATCAGTACGGCGCGCCCAAGTTCACGCAAGACGGATTACCAAAGCTTGAG 40231 | ||| |||| | |||||| || || |||| | || || || ||| || Sbjct 5435 GCCACAGACGAT---TTCGGCGCACCAAAATTCAACAAGGAAGGCCAGCCGGTGCTGAAG 5491 Query 40232 ATGCGCGGCCATGACGTCGAAGAGTTCGTCGGTGTGGTCAGGCGCTATGGGGCAAGCCCA 40291 |||||||||| ||||| |||||||| || || ||||| | || ||||| || ||| Sbjct 5492 CTGCGCGGCCACGACGTTGAAGAGTTTGTTGGCGTGGTTCGTCGGTATGGCGCCAGCGTG 5551 Query 40292 GACGTTCAGCTACTGGTCGACGCTGCAAACAAACCTGCCGAAGTCGGCA-AACTCAATAT 40350 || |||||| |||||| || || || |||| ||||| || || |||| |||| || || Sbjct 5552 GAAGTTCAGGAACTGGTTGATGCGGCCAACAGGCCTGCGGAGGT-GGCACAACTAAACAT 5610 Query 40351 TTCAAGGGCTTGCGGAACCTGTCTTCTCAAGCTGGCCTGAGGA-TAGACAGCAATAGACG 40409 | | ||||| ||||| | ||| | | | |||||| | | | | ||| | | | |||| Sbjct 5611 TGCCAGGGCGTGCGGTAACTGCATGTTGAGGCTGGCGTAAATATTGGACTGTATTGGACG 5670 Query 40410 GAACCCTACCCTATGGCAGCCCTGAGCAGCGAGGTGAAGGCCTTCATCGTTCAGGCTCTT 40469 | | | |||||| || | | || || || ||||||||| ||||| | ||| Sbjct 5671 G-ATGGTGATTTATGGCTGCATTAAAACCAGATGTAAAAGCCTTCATCATTCAGTCGCTT 5729 Query 40470 GCCTGCTTCGATACACCCTCACAGGTGGCAGAGGCCGTCAAGCGAGAATTCAACATCGAG 40529 || ||||| || || || ||| ||| | ||| ||||| | ||| || | | Sbjct 5730 GCGTGCTTTGACACCCCTACACTGGTAGTGGAGTCCGTCCAAAAAGAGTTTGGGCTAAAA 5789 Query 40530 GTGAGCCGTCAGCAGGTGGAGTCACACGACCCCACCAAGCGATGCAGTAAAACCCTGGCC 40589 | | ||||||||||| || || |||||||| || ||| || ||||| | |||||| Sbjct 5790 ATCACGCGTCAGCAGGTTGAATCTCACGACCCGACAAAGGTTAGCGGTAAATCGCTGGCC 5849 Query 40590 AAGCGTTGGGTGGACATGTTCCACGACG-CGCGAGA 40624 ||| ||||| ||| |||||||| ||| ||||||| Sbjct 5850 AAGAAGTGGGTAGACCTGTTCCAC-ACGACGCGAGA 5884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162917710710864