Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2002 129 1e-24 >seq2002 Length=109662234 Score = 129 bits (142), Expect = 1e-24 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 || ||||||||||| ||| | || ||||| || |||||| | ||||||||||| ||||| Sbjct 78263434 GCTTTATGGTGGTATTATGTCTCGAAAGGAATTGAATACCTCGATACAGTGTTCTTCATC 78263493 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || || || || || || || |||| ||||| || || ||||| ||||| || ||||| Sbjct 78263494 CTGAGAAAGAAATTCAACCAAATTAGTTTTCTTCATGTCTATCACCATTTCACCATGTTC 78263553 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 ||||| | ||| | |||||||| ||| ||||||| || || Sbjct 78263554 ACTTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 78263594 Score = 100 bits (110), Expect = 5e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 58669 GGTACAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTT 58728 ||| || |||||| | |||| || || || ||| |||| ||||| || ||||| || || Sbjct 78266143 GGTGCAGTTCCATGTGACTATTGGCCACACAGCTTTGTCTATTTATATTGATTGTCCTTT 78266202 Query 58729 TCCAAAATGGACGCAATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGG 58788 || ||||||| ||| ||| || || ||||| |||| || || || || |||||||| Sbjct 78266203 CCCTAAATGGATGCACTGGGGTGTAATTTTCTATGCTATCACCTTCATTTTCTTGTTTGG 78266262 Query 58789 TAACTTCTATTTTAGAACATACAAG 58813 ||||||||| | | | ||||| ||| Sbjct 78266263 TAACTTCTACTATCGGACATATAAG 78266287 Score = 98.7 bits (108), Expect = 2e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600 || ||||| || |||||| ||||| | ||||| |||||||||||||| | ||||| || Sbjct 78265319 GCTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTTATTATGTACATGTATTACGGA 78265378 Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660 | || || ||||| | || || | || ||| | |||||||| || ||| | |||||| Sbjct 78265379 TTAGCTGCCTGTGGCCCTAAAGTTCAGAAATATCTGTGGTGGAAACGATACTTGACTATA 78265438 Query 58661 ATGCAATTGGTA 58672 ||||||||||| Sbjct 78265439 TTGCAATTGGTA 78265450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 900799370464960