Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_024782.1 Length=36838 Score E Sequences producing significant alignments: (Bits) Value seq38063 122 2e-23 seq145547 109 1e-19 seq145416 105 2e-18 seq139399 86.0 1e-12 >seq38063 Length=1017 Score = 122 bits (134), Expect = 2e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 15031 ACGAGCTGCGCTTGCGCGATAACAGCATCGCGGGCGAGGTACTCCAGCCGTTCGGCTGGA 15090 ||||||||||| ||||||| |||||| || || || ||| |||||| ||||||| Sbjct 767 ACGAGCTGCGCCTGCGCGACAACAGCGCCGATGGAGAATCGCTCTGGCCGTTTGGCTGGA 826 Query 15091 TCATGCACAAGCCGCGTTCGCGCTCGGGATACGTGGCGCGTAGCGGGCTGTTCCGCGTGC 15150 ||||||||| || || |||||| || ||| | || || | || ||||| || || | Sbjct 827 TCATGCACACGCACCGCTCGCGCAGCGGCTACATCGCCCGCACGGGTCTGTTTCGGGTAC 886 Query 15151 TGGCCTGGCCGTACCTGTTCAAGCACTACTCCACGGCCGACCTGGCGGAAATGCTCGAAA 15210 | |||||||||| || |||||| ||| || | ||||||||| || | || || | Sbjct 887 TCGCCTGGCCGTGGCTCTTCAAGAACTTTGCCGTGCGCGACCTGGCTGAGTTCCTGGAGA 946 Query 15211 TCTACGGTCTGCCGATCCGGCTCGG 15235 ||||||| |||||| | || || || Sbjct 947 TCTACGGGCTGCCGCTGCGTCTGGG 971 >seq145547 Length=350 Score = 109 bits (120), Expect = 1e-19 Identities = 87/105 (83%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 25024 GCCATGCGGCAGTTGCCGGCGCAGATCACCGACGTGGTCACCAGCCTGGCCAGCGGGATG 25083 ||||||||| | |||| || ||||| || || |||||||||||| |||||||||| ||| Sbjct 236 GCCATGCGGATGCTGCCCGCCCAGATGACAGATGTGGTCACCAGCATGGCCAGCGGCATG 295 Query 25084 CCACTGTGGATGGTTGCCATCCAGCAAGGCGGGCAGATCAAGGAC 25128 || | ||| | || || ||||||||||||||||| ||||||||| Sbjct 296 CCGATCTGGCTTGTGGCGATCCAGCAAGGCGGGCAAATCAAGGAC 340 >seq145416 Length=624 Score = 105 bits (116), Expect = 2e-18 Identities = 335/515 (65%), Gaps = 17/515 (3%) Strand=Plus/Minus Query 20493 TGCGCGAGTGGATCGGTCAGCGTGTCATCAAGGACATGGCGGCCCAGGGCTACCAGATCA 20552 ||||||| ||||| || |||| |||||| | | || | ||| |||||| ||| Sbjct 614 TGCGCGAATGGATTGGCGAGCGGGTCATCCATGGGCTGCAGAGCCACGGCTACACCGTCA 555 Query 20553 CCAACAAGCTCTTCGAATCGACCGTGGGCGTGAAACGTACCGACATCGAGGACGACAACC 20612 ||||||| |||||| ||| |||| ||| || || | ||| || ||||||| | Sbjct 554 AAAACAAGCCCTTCGAGCTGACGGTGGCCGTTCCGCGCACGGCCATTGATGACGACACCT 495 Query 20613 TCGGCGTCTACGGACCGCTCATGCAGGAAATGGGGCGCGCTGCCGGCGCGCATCCCGACG 20672 || |||||| ||||| ||| || |||| ||| |||| | || | || |||| Sbjct 494 ATGGTGTCTACACCCCGCTGATGACCGAGCTGGGTCGCTCTGCTGCGGCCAACCCAGACG 435 Query 20673 AGCTGGTCTTCGCCCTGCTCAAGGCCGGCAACGCCAATCTCTGCTACGACGGTCAAAACT 20732 ||||||| |||| | | |||||||| ||| | || |||||| ||||| || || Sbjct 434 AGCTGGTGTTCGGCATCCTCAAGGCGGGCGATAGCACAGCCTGCTATGACGGCAAACCCT 375 Query 20733 TCTTCGACACCGATCACCCGGTCTATCCGAACGTGGATGGC-ACCGGCACGGCGACCACC 20791 |||| | |||| ||| |||| | | ||| | | ||| | | ||| |||| || Sbjct 374 TCTTTGCAGCCGACCACATGGTCAA---GGACGAGAAGGGCAAGCTGCA-GGCGCAGTCC 319 Query 20792 GTTAGCAACCTGTTCGCGCCGGCCGCTGATCCGGGGGCGGCCTGGTATCTGCTCGACACC 20851 | | |||| || |||| || || | | ||||| ||||||||||| Sbjct 318 AATGCCGACCT-----CGGCGGC----AAT---GGCGAGAAGTGGTACGTGCTCGACACC 271 Query 20852 AGCCGCAGCCTCAAGCCGTTGATCTACCAGGAGCGCATGAAACCGTCGTTCACTTCGATG 20911 | || ||||||| |||||| |||||| |||| ||| || ||| | ||| Sbjct 270 ACTCGGGCGATCAAGCCTCTGATCTTCCAGGACCGCAAGAAGCCCAACTTCGTGGCCATG 211 Query 20912 ACCAAGGAAGACGACGAGCAGGTCTTCATGGCCGACGAGTACCGCTACGGCGTGCGCTCC 20971 || ||| ||| | ||||||| | ||||| |||||||| ||| Sbjct 210 ACGGCCGAAACGGACCCCAACGTCTTCACCAAGGCCGAGTTTGTGTACGGCGTCGATTCC 151 Query 20972 CGCTGCAACGTCGGCTTCGGCTTCTGGCAACTGGC 21006 ||||||||||| || || ||||||||||| |||| Sbjct 150 CGCTGCAACGTGGGATTTGGCTTCTGGCAGATGGC 116 >seq139399 Length=451 Score = 86.0 bits (94), Expect = 1e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 20661 CGCATCCCGACGAGCTGGTCTTCGCCCTGCTCAAGGCCGGCAACGCCAATCTCTGCTACG 20720 |||| ||||||||||| |||||||| || || |||| ||| ||||| | |||| || Sbjct 3 CGCACCCCGACGAGCTCGTCTTCGCGCTCCTGCAGGCGGGCTTCGCCACGCGGTGCTTCG 62 Query 20721 ACGGTCAAAACTTCTTCGACACCGATCACCCGGTC 20755 |||| || ||||||||||||| |||||||| ||| Sbjct 63 ACGGCCAGTACTTCTTCGACACGGATCACCCTGTC 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117436569657600