Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq193866 104 6e-18 seq85448 102 2e-17 seq139306 96.9 9e-16 >seq193866 Length=203 Score = 104 bits (114), Expect = 6e-18 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 9361 CGGAAACACGGACGCGTTGTCGTCGATGAACGCGCACATCAGCAGGTTGGCGAAATCGAG 9420 ||| || ||||||| | ||||||||||| |||||| | ||||||| | ||||| Sbjct 182 CGGGAAGACGGACGATGTATCGTCGATGAAGTTGCACATGAACAGGTTGTCAAAATCTTC 123 Query 9421 TTCGCTGTACTCCAGCCGCAACTGGTCGATGTCGAACAGGTTGCAGCCGCCGCGCAGCGC 9480 ||||||| ||| |||| || ||||| ||| ||||||| |||||||||||||| ||| Sbjct 122 ATCGCTGTTTTCCTCTCGCAGCTCGTCGAGGTCAAACAGGTCGCAGCCGCCGCGCAACGC 63 Query 9481 GTCCTCTACCGTCACGATCTGGCGCCACTGACCGTCAGCGCAGCGCA 9527 || || | | ||||||||||| | || ||| ||||| ||| Sbjct 62 ATCTTCAATGTTGACGATCTGGCGGAATTGCTTGTCCTCGCAGAGCA 16 >seq85448 Length=776 Score = 102 bits (112), Expect = 2e-17 Identities = 165/237 (70%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 17748 GCGCATCATCCATAGATTGCTCAGGGCAAACAACGTATGTAACTGCTGCGTGTTCTTCAC 17807 ||||| |||||| || || || ||||| | |||| | |||| |||||||||||| Sbjct 376 GCGCACCATCCACAGGTTCGATAGCGCAAAAAGCGTAGTGAGCTGCAGCGTGTTCTTCAT 317 Query 17808 CAAGCCTCGATAGCGCACCTTCAAATGCCCGAACTGGCGCTTGATGACCCGGAACGGATG 17867 | || || ||||||||||| | || |||||||| ||||| |||| ||| || || Sbjct 316 GAGCCCCCGGTAGCGCACCTTGGTGTAGCCAAACTGGCGTTTGATCACCCTGAAGGGGTG 257 Query 17868 TTCTACGCGAGCACGAATGCGCGCCTTGACCCGCTCCAACTCATCGACGAGCGCACC--- 17924 || || || || |||| ||||||| | ||||| || || | |||||| | Sbjct 256 CTCCACTTTGGCGCGGATGCTGGCCTTGATCTTCTCCACCTGCTCTATCAGCGCATCAAT 197 Query 17925 CGACACGGTGTTCTTGTCCAAGGCGCGGCGTTTGCTCGGTCGCAATGCCACATGCCA 17981 | | | | | |||||||| || | ||| |||| ||| |||| ||||||||||| Sbjct 196 GGGCTTGTTCTCCTTGTCCAGCGCCCTGCGCTTGCCCGGGCGCATCGCCACATGCCA 140 >seq139306 Length=319 Score = 96.9 bits (106), Expect = 9e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 19924 CTGTATCCCGCCGACCAGCGGGACGCCGTGCGCGCCACGCTGGAGCTG-GAATCCGAGCC 19982 ||||| || | || | ||||| || |||||| |||||||| ||| || |||||||| Sbjct 298 CTGTACCCGGAGGAAGAACGGGAAGCAGTGCGCCGCACGCTGG-GCTATGAGTCCGAGCC 240 Query 19983 GATCACCAAGCTCTTGCAGGAGAACGCCTACCGCGAGCTGGTGTGGCGCCAGCGCGTGAA 20042 |||| ||| || |||| || ||||||||| ||| || ||| ||||||||||| || Sbjct 239 GATCGTCAAAGTCCTGCAAGAATCCGCCTACCGTGAGGTGTTGTTACGCCAGCGCGTCAA 180 Query 20043 CGACGCGGCGCGCGGGGTCATGCTGGCCTTCGCCGAAGGGGA-AGACCTGGAGCAGATCG 20101 || || |||| | || ||| |||||| |||| | | | | ||||| || ||| | | Sbjct 179 TGAGGCAGCGCAGGCCGTAATGGTGGCCTACGCC-ATGAGCAGCGACCTCGATCAGTTGG 121 Query 20102 CGGCGAACTTCAACGTGCAGCGCTTG 20127 | || ||| | ||||| | || ||| Sbjct 120 CCGCCAACAACGACGTGAAACGATTG 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127533561679248