Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq20500 149 3e-31 seq23847 143 1e-29 >seq20500 Length=13099 Score = 149 bits (164), Expect = 3e-31 Identities = 209/290 (72%), Gaps = 5/290 (2%) Strand=Plus/Plus Query 25720 AAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCACTGACTGAACCCCAGAAAGCG 25779 |||||||| | ||||| || ||| |||| || | ||||||||||| || |||| Sbjct 3405 AAGGCGCTCGATTGGGTAGACCGCAACGTCAAGGTAACGCTGACTGAACCGCAAAAAGTC 3464 Query 25780 GGTATTGCGTCATTCTGTCCTTACAACATTGGCCCGGGTAAGTGTTTCCCGTCGACGTTT 25839 || || ||||| ||||| |||| ||||| ||||| || ||||| ||| | || || ||| Sbjct 3465 GGCATCGCGTCCTTCTGCCCTTGGAACATCGGCCCCGGAAAGTGCTTCACCTCAACCTTT 3524 Query 25840 TATAAACGAA--TTAATGCAGGAGATCGAAAAGGTGCCTGCGAAGCGATTCGCTGGTGGA 25897 || || ||| | || || || || || | ||||||||| | || ||| | |||| Sbjct 3525 TACAA--GAAGCTGAACGCCGGCGACCGCATTGGTGCCTGCCGCGAAATCCGCCGCTGGA 3582 Query 25898 TTAAGGACGGTGGCAGGGACTGCCGTATTCGCTCAAATAACTGTTATGGTCAGGTATCCC 25957 | | |||| |||| | || ||||| || ||||| |||| |||||| || ||| | | | Sbjct 3583 TATACGACGCTGGCCGAGATTGCCGCATCCGCTCGAATAGCTGTTACGGGCAGATCTTGC 3642 Query 25958 GTCGTGACCAGGAGAGCGCGCTGGCGTGCTGGGGAATCGACAGAT-AAGC 26006 | || ||||| ||| || |||||| |||||||| | |||| || |||| Sbjct 3643 GGCGCGACCAAGAGGCCGAGCTGGCTTGCTGGGGGCTGGACAAATGAAGC 3692 >seq23847 Length=8263 Score = 143 bits (158), Expect = 1e-29 Identities = 344/513 (67%), Gaps = 18/513 (4%) Strand=Plus/Minus Query 91 CAAATTTGGGACATCGTCACTCAATATGTCGTCAATTTTCCTCGCGTGCTCTGTCAAATG 150 || ||| | ||||| | | ||| | ||||||||||| ||||| || || || | ||| Sbjct 7397 CAGATTAGTGACATTGCCCGCCAAGACTTCGTCAATTTTTCTCGCATGTTCGGTTAGATG 7338 Query 151 ATTAGGTGCAAGGTGTGCGTACCTACGCACCATTTCGATAGACTCCCAGCCGCCCATTTC 210 | || | ||||| || || | | |||||||| || |||||| ||||||||||| Sbjct 7337 GGTTGGGGATAGGTGAGCATAGCGCTGAACCATTTCTATGCTCTCCCATCCGCCCATTTC 7278 Query 211 CTGAAGTACTGACAGCGGTACACCTGACTGAATTAACCAACTGGCCCAAGTGTGGCGGAG 270 || ||| | || || || || |||| ||||| |||||||| ||||| || || || || Sbjct 7277 TTGCAGTGCCGAAAGTGGCACGCCTGCCTGAACCAACCAACTCGCCCACGTATGCCGCAG 7218 Query 271 GTCATGAAAACGGAAATTTTCAATTCCTGCCCGACG--ACATGCTGTTAACCACGATGTG 328 || ||||| ||||||| ||||| |||| || | | |||| ||| | || | Sbjct 7217 ATCGTGAAAGCGGAAATCAGTTATTCCCGCCCTCCGTTTCCCGGTGTT--CCAAGCTGAG 7160 Query 329 TTATAGTCCAGGCGCATCTTTCTGA-TGCTTGGTGTCATTGTCCCGTCAGGCCTTCTGGC 387 |||| || | ||||| || || | ||| | |||| | ||| |||| | | | Sbjct 7159 TTATCATCAACCCGCATTTTCCTAACTGC-CGCGGTCACTCCGCCGCCAGGTCGTTTCCG 7101 Query 388 AGCAGTGGTATAAACAAACACCCAGCGGTGA-TGTTTGCCTATTTGATCACGCAACACCT 446 || || |||| ||||| || | | |||| || || || || ||||||||||| Sbjct 7100 TGCTGTCGTATGCACAAAGACGTA-CCGTGAGTGCTTCCCAATCTGATCACGCAATGTTC 7042 Query 447 TGCAGGCAGTGTCATTCAGTGCGACCCCAATAG-----CGCGGTTTGACTTACTGTCTTC 501 ||| || || || ||||| || || ||||||| | || |||| | || || Sbjct 7041 GGCACGCGGTATCGTTCAGAGCAACGCCAATAGCCTTACCCGCTTTGGC-----GTTCTC 6987 Query 502 AGGGTTTACCCAAGCAACACGTCGCTGCATATCGATTTGTTGCCACTCCAGATTAATAAT 561 |||| | ||| || || || ||||| || | || |||||| |||| || || Sbjct 6986 TGGGTGGATCCATGCCACCTTTCTTTGCATGTCAACCTGCGACCACTCGAGATCGATGAT 6927 Query 562 GTTTGATCTCCTCAGGCCAGTTGCCAGTGCAAA 594 ||||| | | |||||||||||||| ||||| Sbjct 6926 ATTTGAACGGCGTAGGCCAGTTGCCAGGGCAAA 6894 Score = 89.7 bits (98), Expect = 2e-13 Identities = 206/308 (67%), Gaps = 12/308 (4%) Strand=Plus/Minus Query 59306 ACGTGAAGTAATCCCCAGCCAGGTGGTAAATCCTCAATTGAAATAATTCCCGGCGCACTA 59365 |||| || ||||||||||| || | ||||| || || | ||||| | | Sbjct 1781 ACGTTCAGCAATCCCCAGCCTTCAGGCAGCTCCTCGATGCGGATCAGCCCCGGTTCGCAG 1722 Query 59366 ATAAAGAATCGCCAGTCGCCCATTCCAAGAGACGGATTTTTACGAAAACGCTTTTTTCTA 59425 || ||||| ||||| || ||||| || || || | | || || |||||||| | Sbjct 1721 ATGAAGAAGCGCCAATCCCCCATACCGAGCTCAGGTTGAATGCGGAACCGCTTTTTCCGG 1662 Query 59426 TCTGCCAACAAGTCAGCACGAGAACATTTCGCCTCTATCAGGCATGATGCTGAATTTCTG 59485 ||||| | |||||| | || || || || || || |||||||| || || ||| | | Sbjct 1661 TCTGCAAGGAAGTCACCGCGTGAGCACTTGGCTTCGATCAGGCAGGAGGCCAGATTACGG 1602 Query 59486 AATCCCATAGCATCTGGCTGTTCTCCGGTACTGGTTACA---GCTATAAAGCGGTCATGA 59542 || || || || || |||||||| |||| ||| ||| || | |||||| ||||| Sbjct 1601 AAGCCGATTGCGTCAGGCTGTTCGCCGG---TGGAGACAGCGGCAACAAAGCGATCATGG 1545 Query 59543 AAACAAACCTTGAACCCG---TTGCGCTTAAGGAACTTGTACGCAATCTGACAGAGTTCG 59599 ||| ||| ||| ||| |||||| |||||| | |||||| | || ||| || Sbjct 1544 AAAGCGACCGAGAAACCGTTATTGCGC---AGGAACCGCTCGGCAATCAGGCATAGTGCG 1488 Query 59600 CGGTGTGT 59607 | ||| || Sbjct 1487 CTGTGCGT 1480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199946797150360