Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 197 2e-44 seq97615 179 5e-39 seq97618 129 8e-24 seq2002 104 3e-16 >seq1 Length=190651702 Score = 197 bits (218), Expect = 2e-44 Identities = 183/231 (79%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| |||||||| |||||| |||| |||| ||| |||| ||| Sbjct 9841531 TCTACAAGGTGCTAAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCA 9841478 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| |||||||||||||| | || ||||||| |||||| | Sbjct 9841477 TGGGCATCATGAACTCCTTTGTCAACGACATCTTTGAGCGCATCGCGGGTGAGGCCTCGC 9841418 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||||| || |||||||||| ||| ||| | |||| ||||||||||| ||||||| Sbjct 9841417 GCCTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACAGCCGTGC 9841358 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | ||| ||| || ||||||| ||||||||||||||||||||||| Sbjct 9841357 GCCTGCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 9841307 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 46356656 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 46356603 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 46356602 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 46356543 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| |||| ||||||||||| |||||||| Sbjct 46356542 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 46356483 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| || || |||||||||| Sbjct 46356482 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 46356434 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || | | ||| || |||| ||||| Sbjct 46373189 TACAAGGTGCTGAAGCAGGTGCACCCCGACACGGGT-----ATC-TCGTCCAAGGCCATG 46373242 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 46373243 GGTATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 46373302 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| |||| ||||||||||| |||||||| Sbjct 46373303 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 46373362 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| ||||| |||||||||| Sbjct 46373363 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTCTCGGAGGGCACCA 46373411 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 46387985 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 46388038 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 46388039 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 46388098 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| |||| ||||||||||| |||||||| Sbjct 46388099 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 46388158 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| || || |||||||||| Sbjct 46388159 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 46388207 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 46443935 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 46443988 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 46443989 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 46444048 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| |||| ||||||||||| |||||||| Sbjct 46444049 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 46444108 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| || || |||||||||| Sbjct 46444109 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 46444157 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 46450574 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 46450627 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 46450628 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 46450687 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| |||| ||||||||||| |||||||| Sbjct 46450688 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 46450747 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| || || |||||||||| Sbjct 46450748 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 46450796 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 46470009 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 46469956 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 46469955 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 46469896 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| |||| ||||||||||| |||||||| Sbjct 46469895 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 46469836 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| || || |||||||||| Sbjct 46469835 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 46469787 Score = 176 bits (194), Expect = 6e-38 Identities = 176/227 (78%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 46460743 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 46460796 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 46460797 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 46460856 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| |||| ||||||||||| |||||||| Sbjct 46460857 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 46460916 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| |||||| ||||||| |||||| || || |||||||| Sbjct 46460917 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTGTCGGAGGGCAC 46460963 Score = 167 bits (184), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||||| ||||||||||||||| || | |||| || || ||||| Sbjct 46382001 TACAAAGTGCTGAAGCAGGTGCACCCCGACACAGG-----CATC-TCATCTAAAGCCATG 46381948 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 46381947 AGTATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 46381888 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| |||| ||||||||||| |||||||| Sbjct 46381887 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 46381828 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| ||||| |||||||||| Sbjct 46381827 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTCTCGGAGGGCACCA 46381779 >seq97615 Length=811 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 288 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 235 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 234 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 175 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| |||| ||||||||||| |||||||| Sbjct 174 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 115 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| || || |||||||||| Sbjct 114 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 66 >seq97618 Length=694 Score = 129 bits (142), Expect = 8e-24 Identities = 136/178 (76%), Gaps = 6/178 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || | | ||| || |||| ||||| Sbjct 523 TACAAGGTGCTGAAGCAGGTGCACCCCGACACGGGT-----ATC-TCGTCCAAGGCCATG 576 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| ||| Sbjct 577 GGTATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 636 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||| || |||||||||| || ||| |||| ||||||||||| ||||||| Sbjct 637 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGC 694 >seq2002 Length=109662234 Score = 104 bits (114), Expect = 3e-16 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 |||| |||| ||||| |||||||||||||||||||| ||||| | || || | | Sbjct 83857550 CTCCTCCAAGGCCATGAGCATCATGAACTCGTTTGTCAATGACATCTTTGAGCGGCTGGC 83857609 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 | ||||| |||||||| | | |||| | ||| ||| ||| || | ||| | Sbjct 83857610 CGTGGAGGCGTCGCGCCTGGCTCAGTACAACCACCGCTCCACCATCACCAGCAGGGAGGT 83857669 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 ||||| |||||||| ||| | ||| || || ||||||| ||||||||| ||||| || Sbjct 83857670 GCAGACGGCCGTGCGGCTGCTGCTGCCTGGTGAGCTGGCCAAGCACGCCGTGTCCGAAGG 83857729 Query 725138 CACCA 725142 ||||| Sbjct 83857730 CACCA 83857734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7155503240196332