Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq7705 134 1e-26 seq8367 123 2e-23 >seq7705 Length=13065498 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || || ||| | || ||||||||||| || ||||| Sbjct 4578839 CTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 4578780 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || |||||||||| |||||| ||||| | Sbjct 4578779 GATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 4578720 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | ||| ||||||| |||||| || || || ||||| || ||||| Sbjct 4578719 CTCAATGGTGTCACTGGGTTCAACCTCCAACGTGATGGTCTTGCCAGTCAAGGTCTTCAC 4578660 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 4578659 AAAGATCTGCAT 4578648 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || || ||| | || ||||||||||| || ||||| Sbjct 4578383 CTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 4578324 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | |||| || |||||||||| |||||| ||| | | | Sbjct 4578323 GATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 4578264 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || | ||||||||||| ||||| || || || ||||| || ||||| Sbjct 4578263 CTCGATGGTATCACTGGGTTCCACCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 4578204 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 4578203 GAAGATCTGCAT 4578192 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || || ||| | || ||||||||||| || ||||| Sbjct 4578611 CTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 4578552 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||| || | |||| || |||||||||| ||||| ||| | | | Sbjct 4578551 GATCAGCCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 4578492 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||||| ||||| || ||||||||||| || ||||| Sbjct 4578491 CTCAATGGTGTCACTAGGCTCGACCTCCAGAGTGATGGTCTTACCCGTCAAGGTCTTCAC 4578432 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 4578431 AAAGATCTGCAT 4578420 >seq8367 Length=9740059 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 |||||||| || | || ||| || || |||||||| || | || ||| || |||| Sbjct 8893430 CAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTC 8893371 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || ||||| |||| || |||||| || | ||||| || |||||||| Sbjct 8893370 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTC 8893311 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 |||||| ||||| | || | | ||||| || | ||| ||||| | ||||| || Sbjct 8893310 TTGGATCTTGGCCTTCACATTTTCAATAGTGTCACTGGGTTCAACCTCAAGGGTGATGGT 8893251 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || | || |||||||| |||||||| Sbjct 8893250 CTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 8893218 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| ||| |||| ||||||||||| || ||||| Sbjct 8893181 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAA 8893122 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | ||||| || |||||||| ||| || ||||| | Sbjct 8893121 GATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTT 8893062 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | || ||||| | ||||| || || || |||| || ||||| Sbjct 8893061 TTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 8893002 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 8893001 AAAGATCTGCAT 8892990 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | || ||| ||| |||| ||||||||||| || ||||| Sbjct 8893636 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAG 8893577 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||| || | ||||| || || ||||| |||||| ||||| | | Sbjct 8893576 ATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGGATCTTGGCCTTCACATTC 8893517 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || || | ||||||||| Sbjct 8893516 TCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCAGTAAGGGTTTTCACA 8893457 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 8893456 AAGATCTGCAT 8893446 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| || | || ||||||||||| || || || Sbjct 8892953 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAA 8892894 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | ||||| || |||||||| ||| || ||||| | | Sbjct 8892893 GATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTCACATT 8892834 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | || ||||| | ||||| || || || |||| || ||||| Sbjct 8892833 TTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 8892774 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 8892773 AAAGATCTGCAT 8892762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449490321892880