Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq30879 185 1e-41 >seq30879 Length=12587 Score = 185 bits (204), Expect = 1e-41 Identities = 371/550 (67%), Gaps = 0/550 (0%) Strand=Plus/Minus Query 161157 AGGAAGTAGAACCTGATGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTT 161216 ||||||| | || ||||| |||| || || | || || ||||| ||| || |||| Sbjct 11462 AGGAAGTCAAGCCCGATGAAGTCTATAATCTTGCTGCTCAAAGTCACGTGGCGGTTTCTT 11403 Query 161217 TCGAGGAACCTGAATATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGG 161276 | || || || |||||||| || | | ||||| | || || || || | |||| | Sbjct 11402 TTGAAGAGCCGGAATATACGGCCAATTCGGATGCATTAGGTACACTTCGAATTCTGGAAG 11343 Query 161277 CAGTTCGTCTCCTAGGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGT 161336 || ||||| | ||| ||| ||||| | || |||||||| || ||| Sbjct 11342 CAATTCGTATTGCGGGTTTGAAAGATACAACAAAATTTTATCAGGCATCGACATCCGAGC 11283 Query 161337 TGTATGGGTTGGTACAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTC 161396 | || || |||| ||||| | ||| || ||||||||||| ||||||||||| || || | Sbjct 11282 TCTACGGCCTGGTTCAAGAAATACCTCAAAAAGAAACAACGCCTTTCTACCCGCGTTCAC 11223 Query 161397 CATATGGCGTAGCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATG 161456 | |||| ||| ||||| | |||| || ||||| |||||||| || |||| Sbjct 11222 CCTATGCCGTGGCTAAGATGTATGCTTACTGGATCACGGTCAACTACAGGGAAGCCTATG 11163 Query 161457 GGATGCACGCCAGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTT 161516 | ||| |||| | | || ||||| ||||| |||||||| || || ||||| || | Sbjct 11162 GCATGTACGCGTGCAACGGAATTCTTTTCAATCATGAGTCTCCGATTCGCGGTGAAACAT 11103 Query 161517 TCGTAACCCGTAAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTC 161576 |||| || || |||||||| | | || | ||||| | ||||| || || || | Sbjct 11102 TCGTGACTCGAAAGATTACGCGTGCTCTGGCGCGTATCAAGCTTGGACTGCAAGAATGCC 11043 Query 161577 TATACCTAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGG 161636 | || || || ||| | || | || || |||||||| || |||||||| ||| Sbjct 11042 TTTATCTTGGAAATATGAATGCGCTTCGCGACTGGGGTCACGCGCGTGACTATGTTGAGA 10983 Query 161637 CTATGTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAG 161696 |||| ||||| |||| ||||| | | || |||| ||||||||| || ||| || Sbjct 10982 TGCAGTGGCTGATGCTACAGCAGGACAAGGCGGAAGACTTTGTGATTGCTACGGGTGAAC 10923 Query 161697 AGTATTCAGT 161706 || | || || Sbjct 10922 AGCACTCGGT 10913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 727819318781680