Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_027298.1 Length=36814 Score E Sequences producing significant alignments: (Bits) Value seq38063 118 2e-22 seq201347 109 1e-19 seq145547 95.1 3e-15 >seq38063 Length=1017 Score = 118 bits (130), Expect = 2e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 15303 ACGAGCTGCGCTTGCGCGATAACAGCATCGCGGGCGAGGTACTCCAGCCGTTCGGCTGGA 15362 ||||||||||| ||||||| |||||| || || || ||| |||||| ||||||| Sbjct 767 ACGAGCTGCGCCTGCGCGACAACAGCGCCGATGGAGAATCGCTCTGGCCGTTTGGCTGGA 826 Query 15363 TCATGCACAAGCCGCGTTCGCGCTCGGGATACGTGGCGCGTAGCGGGCTGTTCCGGGTCG 15422 ||||||||| || || |||||| || ||| | || || | || ||||| ||||| Sbjct 827 TCATGCACACGCACCGCTCGCGCAGCGGCTACATCGCCCGCACGGGTCTGTTTCGGGTAC 886 Query 15423 TGGCCTGGCCATACCTGTTCAAGCACTACTCCACGGCCGACCTGGCGGAAATGCTCGAAA 15482 | |||||||| | || |||||| ||| || | ||||||||| || | || || | Sbjct 887 TCGCCTGGCCGTGGCTCTTCAAGAACTTTGCCGTGCGCGACCTGGCTGAGTTCCTGGAGA 946 Query 15483 TCTACGGTCTGCCGATCCGGCTCGG 15507 ||||||| |||||| | || || || Sbjct 947 TCTACGGGCTGCCGCTGCGTCTGGG 971 >seq201347 Length=207 Score = 109 bits (120), Expect = 1e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 6778 CGAGCAGTACGGCACCAAGCTGGGAGGCAAGAAAGGGAACGTCTCCCTCCTGAGCTTCGA 6837 ||||||||||||| ||||| | || ||| | || || |||||| ||| || ||| Sbjct 6 CGAGCAGTACGGCGCCAAGATCGGCGGCGACAAGGGCAACGTCAGCCTGTATTCCTACGA 65 Query 6838 TGGCCGCTACATGATCAAGAAAGCGATCCAGGAAACCATCCAGTTCGACGAGCGTATCCA 6897 |||||||| || |||| | || |||||| |||||||||||||| ||||| | || Sbjct 66 TGGCCGCTTCAAGATCCTGCGCGCCTGCCAGGACACCATCCAGTTCGATGAGCGCCTGCA 125 Query 6898 GGCCGCCCGCGAGCTGATCGAGGAATGCCTTCGCGACTGGACCCAGGGCGCCAGGCCCGA 6957 ||||||| | || ||||| || ||||| |||||||||| | ||| | | |||| Sbjct 126 GGCCGCCAAGGCCCTCATCGATGAGTGCCTGAACGACTGGACCGAAGGCTCACGCGCCGA 185 Query 6958 AGTGGTCACCCTGGT 6972 || ||||||||| Sbjct 186 GCTGCGCACCCTGGT 200 >seq145547 Length=350 Score = 95.1 bits (104), Expect = 3e-15 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 25003 GCAATGCGACAGCTGCCGATGCAGATTACCGATGTGGTCACCAGCCTGGCCAGCGGGATG 25062 || ||||| |||||| ||||| || ||||||||||||||| |||||||||| ||| Sbjct 236 GCCATGCGGATGCTGCCCGCCCAGATGACAGATGTGGTCACCAGCATGGCCAGCGGCATG 295 Query 25063 CCGTTGTGGATGGTTGCCATTCAGCAAGGCGGACAGATCAAGGAC 25107 ||| | ||| | || || || ||||||||||| || ||||||||| Sbjct 296 CCGATCTGGCTTGTGGCGATCCAGCAAGGCGGGCAAATCAAGGAC 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117359980590432