Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq23847 149 2e-31 >seq23847 Length=8263 Score = 149 bits (164), Expect = 2e-31 Identities = 356/528 (67%), Gaps = 39/528 (7%) Strand=Plus/Minus Query 21360 GTCTATTTGCCGTGCGTGTTCGGTAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAAC 21419 ||| |||| | || |||||||| || || | || | ||||||||||| || |||| Sbjct 7367 GTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAAC 7308 Query 21420 CATTTCGATAGACTCCCAGCCTCCCATTTCCTGTAACACTGACAATGGGACTCCGGCTTG 21479 |||||| || |||||| || |||||||| || | | || | ||| || || || || Sbjct 7307 CATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCCTG 7248 Query 21480 AACCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCATCAATACCAGC 21539 ||||| |||||| ||||| || || | || |||||||| | ||||||| || || || Sbjct 7247 AACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCCGC 7188 Query 21540 ---CCGTCTCAGCGCCGCT-TTCCAGGCTGTGTTTGCGTCATACCGCATCTTCCTTACTG 21595 |||| || ||| | ||||| |||| ||| | ||| |||||| ||||| || Sbjct 7187 CCTCCGTTTC----CCGGTGTTCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAAC-- 7134 Query 21596 TTGGCGCTTTCGTTCCGTC------TGGTTT-GGTACAGCTTTCCTTGTAT--ACAAATA 21646 || ||| || |||| | | |||| || ||| || |||| ||||| | Sbjct 7133 -TGCCGCGGTCACTCCGCCGCCAGGTCGTTTCCGT---GCTGTC---GTATGCACAAAGA 7081 Query 21647 CCCAACGGTGA-TGATTCCCGATTTGTTTTTTCAATACGCGACATGCAGTATCATTCAGC 21705 | || |||| || ||||| || || | |||| || || || ||||| ||||| Sbjct 7080 -CGTACCGTGAGTGCTTCCCAATCTGATCACGCAATGTTCGGCACGCGGTATCGTTCAGA 7022 Query 21706 GCAACGCCAA-----TTGCGCGGTTTGATTTACTCTCTTCCGGGTTTATCCATGCCACCC 21760 |||||||||| || | || |||| | |||| |||| |||||||||||| Sbjct 7021 GCAACGCCAATAGCCTTACCCGCTTTGGCGTTCTCT-----GGGTGGATCCATGCCACCT 6967 Query 21761 GGCGCTGCATGTCTATTTGTTGCCATTCAAGGTTGATGATGTTCGAGCGTCTTAAGCCTG 21820 | |||||||| | || ||| || || | |||||| || || || | || ||| | Sbjct 6966 TTCTTTGCATGTCAACCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAG 6907 Query 21821 TTGCCAGTGCAAATTCAACAACAGACTTTAATGGCTCCGGACATTCAT 21868 ||||||| ||||| | ||||| | | | || | ||||| ||| ||| Sbjct 6906 TTGCCAGGGCAAAAACGACAACGGGCCTAAACTGTTCCGG-CATGCAT 6860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122386138123332