Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2976 125 6e-24 seq2002 118 8e-22 >seq2976 Length=93210757 Score = 125 bits (138), Expect = 6e-24 Identities = 122/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 ||||||| ||||||||||| ||| | || ||||| || ||| ||||||||||||| Sbjct 47119921 TGATGGCTTTGCCACCTTGCCATGCTCTTTGCCAGTTCTATGTTCTAAATGGTGAACTGT 47119862 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || ||| ||||||| || || || || ||||||||||| || || || || || || | Sbjct 47119861 CTTGCCAACTGTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCA 47119802 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 | ||| | |||||||| || |||||||| ||||| || Sbjct 47119801 GCTATTCGCTGCTCACATACATGATTGCCCACGTCAC 47119765 >seq2002 Length=109662234 Score = 118 bits (130), Expect = 8e-22 Identities = 91/108 (84%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||||||| ||| | ||||||| || ||||| ||||| || || |||||||| |||||| Sbjct 93264659 CAAGAAGTGCAAATCACAGAAGCTCGTTGTTTCTATGGCTTCCAGATTGCCATGGAAAAT 93264718 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || ||||| ||||||||||||||||| || || |||||||| |||||| Sbjct 93264719 ATACATTCAGAAATGTACAGTCTTCTCATTGACACGTACATTAAAGAT 93264766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396335651772430