Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq2976 113 4e-20 >seq2976 Length=93210757 Score = 113 bits (124), Expect = 4e-20 Identities = 139/189 (74%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 111748 ATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGT 111807 ||| ||||| | ||| || | || || || |||| ||| ||||||||||||||||| Sbjct 47119733 ATAAAATGGTTAAATAGCCTAC-CTTCAGCCCTGTGACGTGGGCAATCATGTATGTGAGC 47119791 Query 111808 AGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATAT 111867 || || || ||||| || || ||||| ||||| ||||||||||| || || ||||| Sbjct 47119792 AGCGAATAGCTGGCAATATTGAAAGGCACTCCTAGTCCCATATCTCCAGACCTCTGATAC 47119851 Query 111868 AGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAAAGTACATGACAAGGAGGC 111927 || || || || |||| | | | ||||| || || ||||| |||| ||||| ||| Sbjct 47119852 AGTTGGCAAGACAGTTCACCATTTAGAACATAGAACTGGCAAAGAGCATGGCAAGGTGGC 47119911 Query 111928 AATGCCATC 111936 || |||||| Sbjct 47119912 AAAGCCATC 47119920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390840784477618