Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq2002 138 1e-27 >seq2002 Length=109662234 Score = 138 bits (152), Expect = 1e-27 Identities = 127/161 (79%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729 || || |||| |||| | |||| ||||| || ||||| || ||||| | |||||||| Sbjct 78263434 GCTTTATGGTGGTATTATGTCTCGAAAGGAATTGAATACCTCGATACAGTGTTCTTCATC 78263493 Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789 ||||||||||||| |||||| |||| ||| | || || || |||||||| |||||||| Sbjct 78263494 CTGAGAAAGAAATTCAACCAAATTAGTTTTCTTCATGTCTATCACCATTTCACCATGTTC 78263553 Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 ||||| | ||||| || ||||| ||| ||||||| ||||| Sbjct 78263554 ACTTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 78263594 Score = 91.5 bits (100), Expect = 2e-13 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 32826 GGACAGGCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTAT 32885 |||||| | ||||||||||| ||||| ||| | ||||| |||||||| ||||| | ||| Sbjct 78265314 GGACAG-CTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTTATTATGTACATGTAT 78265372 Query 32886 TACGGATTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTA 32945 ||||||||| | || || ||| | | |||||||| ||||||||| ||| || Sbjct 78265373 TACGGATTAGCTGCCTGTGGCCCTAAAGTTCAGAAATATCTGTGGTGGAAACGATACTTG 78265432 Query 32946 ACTATCATACAATTG 32960 ||||| | |||||| Sbjct 78265433 ACTATATTGCAATTG 78265447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601436959068640