Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq6870 302 6e-77 >seq6870 Length=19584067 Score = 302 bits (334), Expect = 6e-77 Identities = 641/948 (68%), Gaps = 24/948 (3%) Strand=Plus/Minus Query 13608 GACTACGTGAACATGACGGCCGACTGCGTGGCCTTCGTGAAAGACAGGGGGTATCTCGTG 13667 || ||| ||||||||||| ||||||| |||| | | | || | || ||| | Sbjct 5963572 GAGTACCTGAACATGACGAAGGACTGCGGCCGCTTCAAGGAGAGCCGGCGCTACATCGAG 5963513 Query 13668 AGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCAC 13727 || |||||| ||| |||| ||| || |||||||||||||| || || ||||||||| Sbjct 5963512 TTCCCGCTGAGCGAGGAGGAGGCCGACTTCCCCATCGCCTACTCCATGGTCATCCACCAC 5963453 Query 13728 AAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGC 13787 |||||||||||||||||||| |||||| | || ||||||||||||||||| |||||||| Sbjct 5963452 AAGATCGAGATGTTCGAGCGGCTCCTGCGCGCTCTCTACGCCCCGCAGAACGTCTACTGC 5963393 Query 13788 GTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGG 13847 |||||||||||| |||| | || || ||| | || ||| |||||||||| Sbjct 5963392 GTCCACGTGGACGGCAAGGCTCCCGCCGCCTTCCAGCAGGCCGTGCGGGCCATCGCCGCC 5963333 Query 13848 TGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGT 13907 |||||||| ||||| | ||||| ||| ||| | ||||||||||| ||||||| Sbjct 5963332 TGCTTCCCCAACGTCTTCGTGGCCAGCCGCCTGGAGAGCGTGGTGTACGCCTCCTGGTCC 5963273 Query 13908 CGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGG 13967 || ||||||||||||||| ||||||| ||||||| |||||| ||| | Sbjct 5963272 CGGCTGCAGGCCGACCTCAACTGCATGCGGGACCTGCTGCAGAGCCCCGTGCCCTGGCGC 5963213 Query 13968 TACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGG 14027 ||| | |||||| ||| || | |||||||| ||||||||||| |||||| || || Sbjct 5963212 TACGTCCTCAACACGTGTGGCACCGACTTCCCCATCAAGACCAACGCGGAGATGGTCCGC 5963153 Query 14028 GCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCC--CAACC-AC 14084 |||||| | ||| || ||||| | ||||| ||| | ||| || || || Sbjct 5963152 GCGCTGCGAGTGCTGCAGGGGCAGAACAGCATGGAGTCGGAG---AAGCCGACAGCCTAC 5963096 Query 14085 AAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACC 14144 |||| | | ||| | | | ||||| |||| || || | | | ||| Sbjct 5963095 AAGCAGGAGCGCTGGAAGTACCGGCACCGCGTGG--AG----AGCTTCATCTCCCGCACG 5963042 Query 14145 GGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTT 14204 | || | | ||| ||||| ||||||| || || || |||| | ||| ||| | Sbjct 5963041 GCCACGGAGAAGCCCCCGTCGCCGCTGCCCTCGCCGATGTTCACGGGCAGCGCCTACATC 5962982 Query 14205 GCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGC---TC 14261 |||| ||| |||| |||||| ||| || ||| || || | ||| | || || Sbjct 5962981 GCGGCCACGCGGGCCTTCGTGCGGCACGTGCT---GGAGGACCCCGCGGCGCGGCGCTTC 5962925 Query 14262 ATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGA 14321 | | ||| | ||||||| |||||||||||||||||| |||||||||| || | | Sbjct 5962924 CTCGAGTGGGCCAAGGACACCTACAGCCCCGACGAGCACGTGTGGGCCACGCTGAACCGC 5962865 Query 14322 ATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGG 14381 | ||| |||||| | | || ||| ||||| | | || || |||||| Sbjct 5962864 GCGCCCGGCGTGCCCGGCGCCGTGCCGCACAACGACAAGTTCCAGACGTCCGACATGAAC 5962805 Query 14382 GCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTG 14441 || | | | | ||||||||||| ||| || || || | | || || | Sbjct 5962804 GCGCTGCCCCGCCTGGTCAAGTGGCAGTACCTGGACGGCGACACGAGCCGCGGAGCGCCC 5962745 Query 14442 TACCCGCCTTGCGACGGCATCCACGTCCA-CGC--CATCTGCATCTTCGGGTCCGGCGAC 14498 |||||||| ||| ||| || | |||| ||| | ||||| ||| |||| |||| ||| Sbjct 5962744 TACCCGCCCTGCACCGG---CCGCTTCCAGCGCAGCGTCTGCGTCTACGGGGCCGGGGAC 5962688 Query 14499 GTGAAGTGGCTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 ||| ||| || | | | || ||| | ||||||||||||||| Sbjct 5962687 GTGGCCTGGATGCTGCGGCAGCGCCAACTGCTGGCCAACAAGTTCGAC 5962640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656834735567360