Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq20500 264 4e-66 >seq20500 Length=13099 Score = 264 bits (292), Expect = 4e-66 Identities = 480/698 (69%), Gaps = 7/698 (1%) Strand=Plus/Minus Query 45764 CTTGGTCGGATCATGCGACTCGCACTGTTGGCGGCTCACCTCTATACCGAATTCTTCTCG 45823 ||| ||||| || || || || ||| || || | | | || || || |||| | | Sbjct 5828 CTTTGTCGGGTCGTGAGATTCAACCTGCTGACGCGTGATTTTTAGCCCAAACTCTTTTTG 5769 Query 45824 GACAGATGCCGCCACCTGTGCGGGGGTATCGAAACAGGCCAGGGCCTGCACGATGAAGGC 45883 ||| || || | ||| ||| ||||| || || || || || | ||| | ||||||||| Sbjct 5768 GACGGACTCCACTACCAGTGTAGGGGTGTCAAAGCACGCAAGCGACTGAATGATGAAGGC 5709 Query 45884 TTTCACCTCATTGTTCAGGACTGCCATATGGGCTCAC--TCCGTCTTAGCTCTGTCATGG 45941 ||| || || || | | |||||| |||| |||||| | | ||| Sbjct 5708 TTTTACATCTGGTTTTAATGCAGCCATAAA---TCACCATCCGTCCAATA-CAGTCCAAT 5653 Query 45942 ATC-AGGCCGACTTGAGCAGACAGGTTCCGCAGGCCCTCGCGATGTTGATCTTTGCCACT 46000 || | ||| | | | || ||| | ||||| ||||| || ||||| | | |||||| Sbjct 5652 ATTTACGCCAGCCTCAACATGCAGTTACCGCACGCCCTGGCAATGTTTAGTTGTGCCACC 5593 Query 46001 TCTGGCGGCTTGCTGGCAGCGTCGATCATCTCTTGCACTGCCTCACTGGCGCCGTAGCGG 46060 || | ||| || |||| || || | || || || ||| || | |||||||| || || Sbjct 5592 TCCGCAGGCCTGTTGGCCGCATCAACCAGTTCCTGAACTTCCACGCTGGCGCCATACCGA 5533 Query 46061 CGCACCACCCCGACGAACTCATTCACGTCATGCCCGCGCAAGTAGAGGCTCGGCATCCCG 46120 || ||||| || || ||||| | ||||| || ||||||| | || |||| || Sbjct 5532 CGAACCACGCCAACAAACTCTTCAACGTCGTGGCCGCGCAGCTTCAGCACCGGCTGGCCT 5473 Query 46121 TCCGAGCTGAATTTTGGCGCGCCGAACTCGTCTGTCTTCTGGGCTATGTGAAATAGTTCA 46180 ||| | |||||||||| |||||||| |||||||| ||| || ||||| | || ||| Sbjct 5472 TCCTTGTTGAATTTTGGTGCGCCGAAATCGTCTGTGGCCTGTGCGATGTGGTAAAGCTCA 5413 Query 46181 TGCTCCAAAAGCGAGCAAAACTCCACGTCCGAACACTGCGAGCAGTAGTCAGCCGCCAGG 46240 ||||| | || | ||| ||||| |||| |||||||||||||||||||| || || || Sbjct 5412 TGCTCGACCAGGGCGCAGAACTCGGCGTCTGAACACTGCGAGCAGTAGTCGGCAGCGAGC 5353 Query 46241 GTGATGAGGAAGTCCGGCTCTTCACCAAACCATTCACGCATCTGCTGCTCTTGCCGGGCC 46300 ||||| | ||| | |||| | ||||| ||||| ||| |||||||||| || ||||||| Sbjct 5352 GTGATAATGAATTTCGGCACATCACCGAACCACTCATGCATCTGCTGTTCCATCCGGGCC 5293 Query 46301 TTCTGCCAACCTCCAGCGCGGAACATGACCTGCTCGGCCTGGCCCAGGACATAACGGCCT 46360 |||||||| || || ||||| | | |||| || |||||||| || |||| || ||| Sbjct 5292 TTCTGCCAGCCGCCTGCGCGCATCGCCACCTCTTCAGCCTGGCCGAGCACATGGCGCCCT 5233 Query 46361 TGCTTGGTGAATCCAGAGGATGCCCAGAGGACGCGGATGTTCGCGTCGATCAGGTGGGCA 46420 | ||| || | || |||||||| | | ||| | | ||||| ||||| | Sbjct 5232 TTCTTCTCAAACGCGGACGATGCCCACATAAAGCGCAGATCGGCGTCTGCAAGGTGTCCG 5173 Query 46421 TGCTCAGGGTTATGGATGCTGCCGGTGTCAGCAAGGAT 46458 || || |||||| | |||||||| || ||| ||| Sbjct 5172 TGGTCTGGGTTAAACAGGCTGCCGGCATCGTCAATGAT 5135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194284124927292