Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028685.1 Length=62851 Score E Sequences producing significant alignments: (Bits) Value seq20500 167 9e-37 seq23847 100 1e-16 >seq20500 Length=13099 Score = 167 bits (184), Expect = 9e-37 Identities = 213/290 (73%), Gaps = 5/290 (2%) Strand=Plus/Plus Query 30345 AAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCACTGACTGAACCCCAGAAAGCG 30404 |||||||| | ||||| || ||| |||| || | ||||||||||| || |||| Sbjct 3405 AAGGCGCTCGATTGGGTAGACCGCAACGTCAAGGTAACGCTGACTGAACCGCAAAAAGTC 3464 Query 30405 GGGATCGCGTCATTCTGCCCGTATAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTT 30464 || |||||||| |||||||| | ||||| |||||||| ||||| ||| | || || ||| Sbjct 3465 GGCATCGCGTCCTTCTGCCCTTGGAACATCGGCCCCGGAAAGTGCTTCACCTCAACCTTT 3524 Query 30465 TATAAACGAA--TTAATGCAGGCGATCGCCGGGGTGCATGCGAGGCGATTCGCTGGTGGA 30522 || || ||| | || || ||||| ||| ||||| ||| | || ||| | |||| Sbjct 3525 TACAA--GAAGCTGAACGCCGGCGACCGCATTGGTGCCTGCCGCGAAATCCGCCGCTGGA 3582 Query 30523 TTAAAGACGGTGGCAGAGACTGCCGTATCCGCTCAAATAACTGTTATGGTCAGGTATCCC 30582 | | |||| |||| |||| ||||| |||||||| |||| |||||| || ||| | | | Sbjct 3583 TATACGACGCTGGCCGAGATTGCCGCATCCGCTCGAATAGCTGTTACGGGCAGATCTTGC 3642 Query 30583 GTCGCGACCAGGAGAGTGCGCTGGCGTGCTGGGGAATCGACAGAT-AAGC 30631 | |||||||| ||| | |||||| |||||||| | |||| || |||| Sbjct 3643 GGCGCGACCAAGAGGCCGAGCTGGCTTGCTGGGGGCTGGACAAATGAAGC 3692 >seq23847 Length=8263 Score = 100 bits (110), Expect = 1e-16 Identities = 208/306 (68%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 6764 ACGTGAAGTAATCCCCAGCCAGGTGGTAAATCCTCAATTGAAATAATTCCCGGCTCACTA 6823 |||| || ||||||||||| || | ||||| || || | ||||| || | Sbjct 1781 ACGTTCAGCAATCCCCAGCCTTCAGGCAGCTCCTCGATGCGGATCAGCCCCGGTTCGCAG 1722 Query 6824 ATAAAGAATCGCCAGTCGCCCATTCCAAGAGACGGATTTTTACGGAAACGCTTTTTTCTA 6883 || ||||| ||||| || ||||| || || || | | ||||| |||||||| | Sbjct 1721 ATGAAGAAGCGCCAATCCCCCATACCGAGCTCAGGTTGAATGCGGAACCGCTTTTTCCGG 1662 Query 6884 TCTGCCAACAAGTCAGCACGAGAACACTTCGCCTCTATCAGGCATGATGCTGAATTTCTG 6943 ||||| | |||||| | || || ||||| || || |||||||| || || ||| | | Sbjct 1661 TCTGCAAGGAAGTCACCGCGTGAGCACTTGGCTTCGATCAGGCAGGAGGCCAGATTACGG 1602 Query 6944 AATCCCATAGCATCTGGCTGTTCTCCGGTACTGGTTACGGCTATAAAGCGGTCAT-GAAA 7002 || || || || || |||||||| ||||| | |||| | |||||| |||| |||| Sbjct 1601 AAGCCGATTGCGTCAGGCTGTTCGCCGGTGGAGACAGCGGCAACAAAGCGATCATGGAAA 1542 Query 7003 GCAAACCTTGAACCCG---TTGCGCTTAAGGAACTTGTACGCAATCTGACAGAGTTCTCG 7059 || ||| ||| ||| |||||| |||||| | |||||| | || ||| | | Sbjct 1541 GC-GACCGAGAAACCGTTATTGCGC---AGGAACCGCTCGGCAATCAGGCATAGTGCGCT 1486 Query 7060 GTGTGT 7065 ||| || Sbjct 1485 GTGCGT 1480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200431826086952