Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq23847 199 1e-46 >seq23847 Length=8263 Score = 199 bits (220), Expect = 1e-46 Identities = 333/477 (70%), Gaps = 6/477 (1%) Strand=Plus/Minus Query 21267 GTCAATTTGCTTTGCGTGTTCCGTTAAATGGTTCGGAGCAAGGTGAGCATATCGGCGCAC 21326 |||||||| | || ||||| |||| |||| | || | ||||||||||| || | || Sbjct 7367 GTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAAC 7308 Query 21327 CATCTCGATGCTCTCCCATCCTCCCATTTCCTGCAGAACAGAAAGCGGCACTCCGGACTG 21386 ||| || |||||||||||||| |||||||| ||||| | ||||| ||||| || | ||| Sbjct 7307 CATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCCTG 7248 Query 21387 AATTAGCCAACTGGCCCACGTGTGCCTCAGATCGTGGAAACGGAAATCATCAATTCCAGC 21446 || | |||||| |||||||| |||| ||||||||| || ||||||||| ||||| || Sbjct 7247 AACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCCGC 7188 Query 21447 CCGGCGGCAAGCTGCATTCCATGCTCGCTGGTCATCGACGCGCATCTTTCTGATAGTCGG 21506 || || | | ||||| ||| | ||||| || ||||| || || | | || Sbjct 7187 CCTCCGTTTCCCGGTGTTCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAACTGCCGC 7128 Query 21507 CGTCTTTGAGCCATCGGGACGGATGCCTTCTTTCGTATGCACGAACACCCATTTATGA-T 21565 ||| | ||| | || || | | | || |||||||||| || || | ||| | Sbjct 7127 GGTCACTCCGCCGCCAGGTCGTTTCCGTGCTGTCGTATGCACAAAGACGTA-CCGTGAGT 7069 Query 21566 GCTTACCAATCTGGTCACGCAGAACCTT--ACAGGCCGTGTCATTCAGCGCTACGCCAAT 21623 |||| |||||||| |||||| || || || || || || ||||| || |||||||| Sbjct 7068 GCTTCCCAATCTGATCACGC--AATGTTCGGCACGCGGTATCGTTCAGAGCAACGCCAAT 7011 Query 21624 AGCGCGGTTTGACTTGCTGTCTTCAGGGTTCACCCAGGCAACGCGACGTTGCATGTCAAT 21683 ||| | ||| || || |||| | ||| || || | ||||||||||| Sbjct 7010 AGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTTTCTTTGCATGTCAAC 6951 Query 21684 CTGTTGCCATTCCATATTGATGATGTTAGACCGCCTAAGTCCCGTTGCCAGCGCAAA 21740 ||| ||| || | || |||||| || || || | || || |||||||| ||||| Sbjct 6950 CTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTTGCCAGGGCAAA 6894 Score = 111 bits (122), Expect = 4e-20 Identities = 93/112 (83%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 24033 TCCGCCGCCTGACCGAAAGCGGAT--ACCCACTTTCTCGATTCTTCCAGCGCCAAATCAG 24090 ||||| ||||| |||| || || |||||||| | ||||| |||||||||||||||| Sbjct 2589 TCCGCTGCCTGT--GAAAACGCATCGACCCACTTACGTGATTCCTCCAGCGCCAAATCAG 2532 Query 24091 GGCGACCTTGCAACAGGCAGCCAACGATATAGCCGTGCGCACCTATGGCTTC 24142 |||||||||| | |||||| || ||||||||||||||||| || || ||||| Sbjct 2531 GGCGACCTTGAACCAGGCAACCGACGATATAGCCGTGCGCCCCGATAGCTTC 2480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131797019751600