Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028834.1 Length=48216 Score E Sequences producing significant alignments: (Bits) Value seq74242 96.9 1e-15 seq37922 91.5 5e-14 >seq74242 Length=376 Score = 96.9 bits (106), Expect = 1e-15 Identities = 74/87 (85%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 36269 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGCCA 36328 ||||||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||| Sbjct 138 TGGTCGGAGTAGAGGGATTCGAACCCCCGACATTCTGCTCCCAAAGCAGACGCGCTACCA 197 Query 36329 GACTGCGCTACACTCCG--AAAACCTG 36353 |||||||||| |||||| |||||||| Sbjct 198 GACTGCGCTATACTCCGATAAAACCTG 224 >seq37922 Length=2145 Score = 91.5 bits (100), Expect = 5e-14 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 36267 TTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGC 36326 ||||||||||| |||||||||| |||||||||||||||||||||||||||| | Sbjct 617 TTTGGTCGGAGCGGCGGGATTCGAACTCGCGACCCTCTGCTCCCAAAGCAGATGCGCTAC 558 Query 36327 CAGACTGCGCTACACTCCGA 36346 ||| ||||||||| |||||| Sbjct 557 CAGGCTGCGCTACGCTCCGA 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153746169917496