Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq140712 118 2e-22 seq201653 107 4e-19 seq145387 100 6e-17 seq193866 89.7 1e-13 >seq140712 Length=381 Score = 118 bits (130), Expect = 2e-22 Identities = 197/282 (70%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 21211 GAGGCATTCACCTTTGGTGAGCCGGTGCCGGTACTCGACCGCCGTGATATTCTGGATTAC 21270 ||||| || ||||| || || ||| | ||| | || || || || || || |||||||| Sbjct 316 GAGGCGTTTACCTTCGGCGACCCGATCCCGATGCTGGATCGGCGCGAAATACTGGATTAT 257 Query 21271 GTCGAGTGCATCAGTAACGGCAGATGGTATGAGCCACCGGTCAGCTTTACCGGTCTGGCA 21330 | |||||| | || | ||||||||||| || || || | ||| ||||| Sbjct 256 CTGGAGTGCTGCGTCGTCGATCGCTGGTATGAGCCGCCAATCTCTTTCAACGGCCTGGCG 197 Query 21331 AAAAGCCTGCGTGCTGCCGTGCATCACAGCTCACCGATTTACGTTAAA-CGCAATATTCT 21389 || | | || || || ||||||||||| |||||||| ||| | || ||||| || | Sbjct 196 AAGACGTTCCGCGCGGCGGTGCATCACAGTTCACCGATC-ACGATGAAGCGCAACATCTT 138 Query 21390 GGCTTCAACGTTTATCCCGCACCCGTGGCTGTCCCAGCAGGATTTCAGCCGCTTTGTGCT 21449 | | ||| | || |||| | |||||| |||||||||||||||||| || || Sbjct 137 AGTGAGCATGTTCAAGCCCCACCGGCTGCTGTCAAAGCAGGATTTCAGCCGCTATGCGCA 78 Query 21450 GGATTTTCTGGTGTTCGGTAATGCGTTTCTGGAAAAGCGTTA 21491 ||||||| |||||||||| || ||| |||| |||||| Sbjct 77 GGATTTTATGGTGTTCGGCAACAGCTTTATGGAGTCGCGTTA 36 >seq201653 Length=261 Score = 107 bits (118), Expect = 4e-19 Identities = 162/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 19918 CGCCCTGAAAACCGGTCATAACCAGATTTTTCTGTCGGCCAGTAAAACGCAGGCGTATGT 19977 ||||||| | || || | ||| ||||| ||| | || ||| || |||||||| | Sbjct 16 CGCCCTGGACACGGGGCGTAATCAGATGTTTGTTTCCGCCTCCAAGGCGCAGGCGCACCA 75 Query 19978 GTTCCGCGAATACATCATCGCCTTTGCCCGGCTGGTTGACGTTGACCTGACCGGTGACCC 20037 |||| | ||||||| ||||||||| | |||||| || || ||| ||| || | Sbjct 76 GTTCAAAAACTACATCACCGCCTTTGCGCAAGAGGTTGATGTGGAGCTGCGCGGGGAAAC 135 Query 20038 GATTGTCCTGGGCAATAACGGCGCAAAACTGATTTTTCTCGGCACCAACTCCAACACCGC 20097 || ||||| ||| ||| || || || ||||||||||||||||||||||||||| Sbjct 136 CATCATCCTGC-CAA--ACGCGGCTGAATTGCATTTTCTCGGCACCAACTCCAACACCGC 192 Query 20098 ACAGAGCCATAACGGCGACCTGTACGTCGACGAGATTTTCTGGATCCC 20145 |||| ||| ||| | ||||| | ||||| |||||||||||| Sbjct 193 ACAGGGCCGGCCAGGCAATCTGTATCTGGACGAATATTTCTGGATCCC 240 >seq145387 Length=359 Score = 100 bits (110), Expect = 6e-17 Identities = 222/333 (67%), Gaps = 0/333 (0%) Strand=Plus/Minus Query 17525 CTGCTCCTTGTTGACGATGGGAAAATACTTGTCCGCCAGTAGCTGACGTCCCACAATCAC 17584 ||| |||| |||||||| || ||||| |||||||||| || ||| || |||| | Sbjct 334 CTGTTCCTGGTTGACGAGTGGGAAATATTTGTCCGCCAACAGGGAACGACCAACAACGGC 275 Query 17585 CACAAGGTCAGGGTCTTCCTGATACCACGGCTCAATCAGGTTGTTGGTCGCATCCATCAC 17644 || || || | ||| ||||||||||| | | ||||| | ||| ||||||||||| Sbjct 274 GACCAGTTCGGTGTCATCCTGATACCAAGCGGCGATCAGCTCATTGACGGCATCCATCAC 215 Query 17645 CAGTGCATCAAGGCTGGCATAATCACCGCCCTTACCCACGCGGATGACCTCAGAGGTGGT 17704 ||| ||||| ||| || ||| ||||| | | || | ||| || || || Sbjct 214 CAGCGCATCCAGGTTGTGATAGTCACCATCGGTGCCGATGCGAATTTTTTCCGACACAAC 155 Query 17705 GTGCCCTTCCTCGTCAGTGACCTTGCTCATCACGCGCGCCGGGGCTTCATTGCGGTATTT 17764 | || |||||| | ||||| |||||| || | || || | |||||| ||| Sbjct 154 GCTGCCGTCCTCGCCCAGCACCTTATCCATCACCTGCTCTGGCGCACCCTTGCGGACTTT 95 Query 17765 CTGCAGCCAGCCGACCGCCACATCCTGCAGCATCGGATTGCTGCTGCGGTCAGAGGTTTC 17824 ||||| |||||||| || ||||||| || | ||| | || || || ||| Sbjct 94 CTGCAACCAGCCGATGTTAACGTCCTGCAACAGCTTGTTGACGGTGATATCCGACGTTCT 35 Query 17825 GGCACGCCTCACGCCGTTAAAACCGGCCATGAT 17857 ||| || || |||||| ||||| |||||| Sbjct 34 GGCGCGGCTGGTGCCGTTCCAACCGATCATGAT 2 >seq193866 Length=203 Score = 89.7 bits (98), Expect = 1e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 20329 CCTTGCCGGAGGTCTTCTCTGTGCGGACGGCCAGTGGCGGCAGATTGTCACCATTGAGGA 20388 ||| ||||| ||| | ||||| | |||| || | || ||||| |||| |||||| || Sbjct 2 CCTGGCCGGCGGTGTGCTCTGCGAGGACAAGCAATTCCGCCAGATCGTCAACATTGAAGA 61 Query 20389 CGCCCTGAAAGGCGGCTGCACGCTGTTCGACATTGAGCAGCTCAAACGTGAAAACAGCGC 20448 || || ||||||||| ||||| ||| | || |||| | |||||||||| Sbjct 62 TGCGTTGCGCGGCGGCTGCGACCTGTTTGACCTCGACGAGCTGCGAGAGGAAAACAGCGA 121 Query 20449 CGACGATTTTAAAAACCTGTTCATGTGTGAATTTGTTGACGACAAGGCGTCGGTGTTCCC 20508 || |||||| | |||||||||||||| | || | ||||| | |||| || ||||| Sbjct 122 TGAAGATTTTGACAACCTGTTCATGTGCAACTTCATCGACGATACATCGTCCGTCTTCCC 181 Query 20509 GTTCGAGGAGCTGCAACGTTGC 20530 | | | || |||| || ||| Sbjct 182 GATGGGCGAAATGCAGCGCTGC 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104151557715084