Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq149382 154 5e-33 >seq149382 Length=320 Score = 154 bits (170), Expect = 5e-33 Identities = 191/259 (74%), Gaps = 12/259 (5%) Strand=Plus/Plus Query 21896 GCTTACCTCCTACGGCAACACCGCCTCTGCCATGGGCAAGGACCTCAGCCAGATGGTCGA 21955 ||| ||| || |||||| || ||| ||| |||||||||| ||||| |||||| |||| Sbjct 51 GCTCACCAGCTTCGGCAATACGGCCGCTGGCATGGGCAAGAGCCTCATGCAGATGATCGA 110 Query 21956 GGCGGTGGCCGACGCCACCACCGGCGAGTTCGAGCGCCTGAAGGAGTTCGGCATCAAGG- 22014 ||| |||||||| || |||| ||||| ||||||||||| ||||| ||||||||||||| Sbjct 111 GGCCGTGGCCGATGCGGCCACGGGCGAATTCGAGCGCCTCAAGGAATTCGGCATCAAGGC 170 Query 22015 --CCAAGCAGGAAGGCGACAAGGTCTCCCTCACGTTCCAGGGCGTCACCACGACGATCGG 22072 |||||||| ||||||| ||| | |||| |||||||| || |||||| || Sbjct 171 GTCCAAGCAG---GGCGACATGGTGGCGTTCACCTTCCAGGGTGT---CACGACCCGCGT 224 Query 22073 GAACAACGCGGCC---GAGATTGAGGAGTACCTGACGAAGCTGGGCGAGAACCAGTTCGC 22129 ||| || ||||| || || || || ||| ||| | ||| | | | ||||| Sbjct 225 GAAGAATTCGGCCAAGGACATAACCGACTATCTGGAGAACATCGGCAACACCGCGTTCGG 284 Query 22130 CGGGGCCATGCAGCAGCGC 22148 || |||||| |||||||| Sbjct 285 TGGCGCCATGGAGCAGCGC 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175739997039240