Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq145450 100 6e-16 seq49204 91.5 3e-13 >seq145450 Length=302 Score = 100 bits (110), Expect = 6e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 307309 TAGGTATCGATCGGCAGCCAGCCTTCCGGCCACTTGGTCTTGTGAATCCACGGAGCATTA 307368 |||||||||||||||||||||||||| | ||||||||| || |||||||||||||| Sbjct 128 TAGGTATCGATCGGCAGCCAGCCTTCAGCCCACTTGGTGCGATGGATCCACGGAGCATTG 69 Query 307369 CCACGTTCTTTGGCAATACGCAGAGAAGCTTCGATCATGTGGTACATGTGGCGTTCGGCC 307428 || | || ||||| | |||||| || || | ||| | | |||||||| ||| ||| Sbjct 68 CCCAGCTCCTTGGCCAGACGCAGCGACGCCTTGATGGCGAAGAACATGTGGGTTTCAGCC 9 Query 307429 ACA 307431 ||| Sbjct 8 ACA 6 >seq49204 Length=529 Score = 91.5 bits (100), Expect = 3e-13 Identities = 185/261 (71%), Gaps = 18/261 (7%) Strand=Plus/Minus Query 191722 GCTTTCCCTAGATGTCGAGACTATATCTTCCCCTACGTGAGAGGCTTCCCATTTCGAGCC 191781 |||||| || || | | |||||||||||||| | | | |||||| |||||||| | | Sbjct 491 GCTTTCACT-GAAGACCAGACTATATCTTCCTCCCGGAGGGAGGCTCTCCATTTCG-GAC 434 Query 191782 CACTTGAGCCCTACACCGTGATAAGCGGTTAGTCGTTGAACCTTACCCATATCTTTCGAC 191841 |||| | | |||||| || |||| ||||||||||||| || ||| | | Sbjct 433 CACTCG-GTCCTACAGGCTGGTAAGGCCTTAGTCGTTGAACGTTCCCC-------TGGGT 382 Query 191842 TTAGGGTCTTGGCTGCTGATTGTCCAATCTATCTCGTTT-TCAAACCGTCAATACCTGC- 191899 |||| ||| |||||||||| |||||| | ||| || ||| ||||||| || | Sbjct 381 ACAGGG-CTTCGCTGCTGATTACCCAATCCA-CTCACTTCTCAGACCGTCACGCCCGACC 324 Query 191900 TTTCGCGGTAC-TTGTGGTGAGA-CAGCTCTAAGGACGTTCCAGCAATTAGAGAAGATAC 191957 ||||| || ||||||| ||| | ||||||||| || |||||||||||| || || Sbjct 323 TTTCGGCCCACGTTGTGGT-AGAGCGGCTCTAAGGGTGTCCCAGCAATTAGAAGAGGTA- 266 Query 191958 CATCTAGATATCGCTATCTAG 191978 ||||| || ||| ||||| Sbjct 265 TTCCTAGACATTGCTGTCTAG 245 Score = 84.2 bits (92), Expect = 4e-11 Identities = 107/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 55259 GGATTGGGCAATCCGCAGCGAAGCTTCTCTTTG-AGAAGAACGTTCAACGACTAACCCCT 55317 |||||||| |||| |||||||||| || | || ||||||||||||||||| ||| Sbjct 353 GGATTGGGTAATCAGCAGCGAAGCC-CTGTACCCAGGGGAACGTTCAACGACTAAGGCCT 411 Query 55318 AACCAGGGTGTAGAACTTAAGCGAGTTCGAAATGGTGACCCTCTCACGCAGAGGAAGATA 55377 ||||| ||||| || | | | || |||||||| || |||| | | |||||||||| Sbjct 412 TACCAGCCTGTAGGACCGA-GTG-GTCCGAAATGGAGAGCCTCCCTCCGGGAGGAAGATA 469 Query 55378 TAGTCTGTTCCCATGTGAAAGC 55399 ||||||| || |||||||| Sbjct 470 TAGTCTGGTCTTCAGTGAAAGC 491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 986402654050758