Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq2976 102 7e-17 >seq2976 Length=93210757 Score = 102 bits (112), Expect = 7e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 |||||||| | ||| |||||||||||||| | || |||||||| | ||| ||||| Sbjct 47119759 AGCCCTGTGACGTGGGCAATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGC 47119818 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || || || ||||| ||| | || ||||| |||| ||||||||| || || || ||| | Sbjct 47119819 ACTCCTAGTCCCATATCTCCAGACCTCTGATACAGTTGGCAAGACAGTTCACCATTTAGA 47119878 Query 118654 ACATAAAACTG 118664 ||||| ||||| Sbjct 47119879 ACATAGAACTG 47119889 Score = 100 bits (110), Expect = 2e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||| ||||| |||||||| || ||||| || || || || ||||||||| Sbjct 13918109 GTGGTGGAGGAGCTTTTCCGTGATGGGGTCAATTGGGGCCGGATCGTCGCCTTCTTTGAG 13918168 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || || || || ||||| || || |||||||| | | || | | || || |||||| Sbjct 13918169 TTCGGCGGCGTGATGTGCGTCGAGAGCGTCAACCGGGAGATGTCGCCGCTGGTGGACAAC 13918228 Query 3365 ATTGCCGCGTGGATGACAGA 3384 |||||| | |||||||| || Sbjct 13918229 ATTGCCACCTGGATGACCGA 13918248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413308473573304