Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq9582 100 2e-16 seq2976 100 2e-16 >seq9582 Length=68461266 Score = 100 bits (110), Expect = 2e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || |||||||||||||| |||| || | |||||| ||||||| | |||||| || || Sbjct 57331467 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTCAGAGGACGATTCTTCTCAGGA 57331408 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||| || ||| |||||||||||| | ||||| |||||| Sbjct 57331407 ATGGAGAACCATGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 57331360 >seq2976 Length=93210757 Score = 100 bits (110), Expect = 2e-16 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||| |||||||| ||||| || || || ||||||| ||| |||||||| || | | | Sbjct 47123981 CGAAGTGCCTCCATTGGAAACCATAAACTGGTCCCAAGTCCCCCTCTTCTCTA-GAGCAA 47124039 Query 30075 AGCCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30133 | ||||| ||| |||| || || | || || ||||| ||||| |||||||| ||||| Sbjct 47124040 AACCCCTGCTTATCCAGGAACTCACGTGATCCATTGGCATCCCAAATCTTTACACCCTTT 47124099 Query 30134 TCGGAGAGCTCTTTGGAGTTTGTGGACCC 30162 | ||||||||||| | ||||| || || Sbjct 47124100 GCAGAGAGCTCTTTAGCATTTGTAGAACC 47124128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405018307933396