Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq20500 695 0.0 seq40766 163 9e-36 seq64117 91.5 5e-14 >seq20500 Length=13099 Score = 695 bits (770), Expect = 0.0 Identities = 1171/1687 (69%), Gaps = 37/1687 (2%) Strand=Plus/Minus Query 24512 CGCACGTTGGGTTTCAGCGACGGGTGAAGGTGCTCCAGTTCCACCACGTCGCCCACGCTT 24571 || ||||| | |||||||| |||||||| | |||||||||| ||| || || | | Sbjct 12855 CGAACGTTAGATTTCAGCGCTGGGTGAAGCTTTTCCAGTTCCAACACATCCCCGATCTCT 12796 Query 24572 ACGCCATGCCAGGCGCGGGTCACTTCGTA----GCGCACATCGCCCCCTTACGCCAGGTT 24627 ||||||| ||||| | | | |||||||| || || | |||||||||||||| || Sbjct 12795 ACGCCATTCCAGGGGAGAATAACTTCGTATTTAGC-CATGTTTCCCCCTTACGCCAGATT 12737 Query 24628 GGCGCCGTAGATCACGCCGGACAGGCCTTCGTCGTCCTTCTTCACCTGGATGCCCATGGC 24687 ||||||||||| || ||||| || || | |||||| | | || | || || Sbjct 12736 GGCGCCGTAGACAACACCGGAAAGCCCCTGATCGTCCGCAGTGATTTGCAGACCTTCAGC 12677 Query 24688 GCTCATGATCTGGAAGTTGTAGTTGACCTGCGGCAGCGGGCGCGGCAGCGGGATAACACC 24747 ||||||||||||||||||||| || | ||| || ||||| |||| || ||||| || Sbjct 12676 AGACATGATCTGGAAGTTGTAGTTAACGTTCGGTAGTGGGCGAGGCAAAGGAATAACGCC 12617 Query 24748 GGTAGCCATGCCGACTAGTGGAGATACCACGTCACGACGTCGCTGATAGCCCAGGAACTC 24807 ||||||||| || || || || | ||| || || || || | | |||||| Sbjct 12616 CTGAGCCATGCCAACCAGAGGGGAAATCACATCTTTGCGGCGAACGTATGCGATGAACTC 12557 Query 24808 GTTGCCCGACAGGGCGAAGGTCTGGCGAACCGCGCGCGCCGGGATGAAGCGCATGACCGC 24867 |||||| ||| ||||| |||||||||| | | |||| || |||| ||||| Sbjct 12556 GTTGCCTTTCAGCGCGAACGTCTGGCGAATTTCTTTCACCGGTGCAAATGGCATTACCGC 12497 Query 24868 ATCGAGCACGGTGCCGGCCACTACCGCATTCGCACCGCCGCCCATGGTGATCATGTACGG 24927 | | || ||||| ||| || |||| ||| || ||| || Sbjct 12496 TTGCAATACATTGCCGCTCACAAC---------ACCGT---------TGACCACGTATGG 12455 Query 24928 CTGAGCGAGGTTGGCGTTGATTTCCGGGGAAACCCAGAGCACGTCGTAGGCATCGA--CC 24985 ||| || ||||| || ||||||||||| ||||| | ||||||||| | ||| | Sbjct 12454 CTGCGCCAGGTTAGCCCAAATTTCCGGGGATACCCACATCACGTCGTA--CTGCGAAACT 12397 Query 24986 TTGTTCGTGCGCGCAGCCTGGCCGAATGCGCCTTTGGTGAAGAAGTCGATGATCTGCTGC 25045 ||||| ||| || | ||||| || || || |||||| |||| | ||| | Sbjct 12396 TTGTTAACGCGAGCCAACGTACCGAAAGCCCCCTTACCGAAGAACTCGAACAACTGAGTC 12337 Query 25046 GGCGTGGCAGTGGTCAGGTCGATGTTCGCGCCGCCGGCGCCGGAGCCCAGGTTGACCTTG 25105 ||| || |||||||| |||||||| ||||||||||| |||| ||||| |||| ||| Sbjct 12336 ATCGTTGCGGTGGTCAGATCGATGTTAGCGCCGCCGGCACCGGCTCCCAGATTGAGCTTT 12277 Query 25106 ATGGTGTTGCGGTGATTGCGCAGACCCTGAGCTGGGTAGTTCTCGACCTGGATGTTGGTG 25165 || |||||||||| || ||| || ||||| |||||| || ||||| || || Sbjct 12276 TTGCTGTTGCGGTGGTTCTTCAGGCCTTGAGCCGGGTAGCCCTGAACCTGAATTTTTTCA 12217 Query 25166 GCACCGTCCAGGGTGTAGGCAACGATCCGCTTGTTGAACTTGCGGAGCTTCGCGGCCTGG 25225 | ||| | ||| ||||| || ||||| |||| || || | ||| || | ||| Sbjct 12216 TCGCCGCCAAGGTAATAGGCCACCCGGCGCTTATTGACTTTACGCAACTTAGCAGACTGA 12157 Query 25226 GAATCCAGGACCAGGTCGATGCCGACGGTGTTCATGCCGGCGGCATGGCGCCAGTTGACA 25285 |||||||| ||||| || | || |||| || | ||||| || || |||||||| || Sbjct 12156 GAATCCAGAACCAGATCAACACCCACGGAATTAAGACCGGCAGCGTGACGCCAGTTAACC 12097 Query 25286 CCGTAGCCGGCGGTGAATACCGGGATCGGGTCGCCGTCGGAGTTGTACTCGGTGTGATCG 25345 || || || || |||||||| ||||||||||| |||||| | |||||| ||||||||| Sbjct 12096 CCATAACCTGCAGTGAATACAGGGATCGGGTCACCGTCGCTATCGTACTCAGTGTGATCG 12037 Query 25346 AAGGAGTACGGGGCCTGGCCATCGATGCTCACCGACACATCATCGGCGATGTCGCCGACC 25405 || ||| |||| |||||||| || ||||| || || |||||||| || || || || || Sbjct 12036 AATGAGAACGGCGCCTGGCCGTCAATGCTTACTGAGACATCATCAGCAATATCACCAACA 11977 Query 25406 ACGTTGTAGAGCTTGGCGGTCTTGCCGATCGGAAGCACGGTCTGCACCTGCAGGAGATCG 25465 ||||| ||||| || || || || || | | ||| | ||||| || || | ||| Sbjct 11976 ACGTTATAGAGTTTTGCAGTTTTACCAACAGAAAGAATAGTCTGGACACCCATCAAATCA 11917 Query 25466 TTGACGATCTCCATGCCGGTTTCCTGGTTGCGGTACTGGATGATCTGGGCGTCGACCTCG 25525 |||| ||| ||||| ||| |||||||| ||| ||| | ||||||| |||| || Sbjct 11916 TTGATGATTTCCATACCGTCTTCCTGGTCGCGCAGCTGCAGGATCTGGTTATCGATTTCA 11857 Query 25526 GCCCAGAACTCACGACCCAGGCCGGCGAGCGCGTTGCAGGCCAGCATTTCGGGGGTCATG 25585 ||||||| || ||| | | || | | ||| || || ||||||||||| || ||||| Sbjct 11856 ACCCAGAATTCGCGAGCGAAACCACCTACCGCATTACATGCCAGCATTTCAGGCGTCATA 11797 Query 25586 GCGCCGCGATGGTGGGTGATCATCGCGGCGTTCTGGCTGTTCCAGATGTTGCGGTTGGCC 25645 | || | || || ||| || | |||| |||||||||||| ||||| ||| Sbjct 11796 TGTGCACGGTTTGCGGCGAGCATTGCATTATGCTGGGCGTTCCAGATGTTTCGGTTAGCC 11737 Query 25646 TGCAACTCCTGGTAGTGGCCCATCAGGCGAGGATGGGCGGCGATTGCTTGCTGGGTGAGG 25705 || ||| | |||| || ||||| || || || | || | | || || Sbjct 11736 CACAGCTCATTCCAGTGACCGCCGAGGCGGCTATTAGCAGCCAATGTCTCTTTGGAGAAA 11677 Query 25706 AACATGT--GTCCGTACTCCTATTAGGGCGCCGGGGCGGCGACACTGCCGACACGGAAGC 25763 |||||| || | || || ||| ||||| ||||||||| |||| || || | | Sbjct 11676 TACATGTGCGTTTATCCTTCTTTTA-AGCGCC--AGCGGCGACAGTGCCAACGCGCATAC 11620 Query 25764 GGATGCGGATGAAGTCGGTTTCGCCGGAGGCGATGACTGCATCGTCCTGGCTGTACCCGA 25823 | | ||||||||| ||||| |||||| ||||||| || || ||||||||||| |||| Sbjct 11619 GCACGCGGATGAAATCGGTAGCGCCGGCGGCGATGGTAGCTTCATCCTGGCTGTAACCGA 11560 Query 25824 GGACCGTGTCGGTATCGCTCGACGCGATGGCACCCTGGCCGCTGGTGCCGAGCTTGATCG 25883 || | ||| || || | || | || |||||| | | ||| |||||||||| Sbjct 11559 TCACTGAGTCAGTGTCAGCAGTTGCCAGGGTGAATTGGCCGTTAGCGCCAAGCTTGATCG 11500 Query 25884 GCGTGTCCTTCTTGTAGGTGCCGGCCGGGCACAGCACGGCGAGTTCGCGACTCTCTTCGA 25943 | | || |||||||| | ||| | ||| |||| || ||||| || | ||||| | Sbjct 11499 GGCTATCTTTCTTGTACGCGCCAGGTACGCAGAGCAGCGCCAGTTCACGGCCTTCTTCCA 11440 Query 25944 CGTAGTTGCCCACGGCCGAATGGCCGGCGGGAACCGCATCGCGGATGTTGAGACCTTCGT 26003 |||||||||| || || || | ||| || |||||||| ||| ||| || || |||| | Sbjct 11439 CGTAGTTGCCTACAGCGGAGTCGCCAGCAGGAACCGCCTCGGTGATTTTCAGCCCTTGAT 11380 Query 26004 GGTGAGCGCAGTCGATGACGTAGAGTCGGCCAACGCTTGCGC--TTGCCTGGGCGAACAG 26061 ||| || |||||||| ||||| |||||| | | |||| | ||||| ||||| Sbjct 11379 GGTAGGCAACGTCGATGATGTAGATTCGGCC--CTTTAGCGCGGTAGCCTGAGCGAATTC 11322 Query 26062 GTCGCTGCCATTGATCACGGCGAACGTGCCGGGCAGGAGATCCGCGGCGGTCTTGCGGGT 26121 |||||| | ||||| || || ||||| ||||| || ||||||| || ||||||| Sbjct 11321 ATCGCTGGCGTTGATGACTGCAGCAGTGCCTGGCAGAAGTGCCGCGGCAGTGGTGCGGGT 11262 Query 26122 TTCGGTCTTGAACAGCGACTTGCCGTCGATGTTCACGCGACGATAGCGAGACA-TGGCTT 26180 ||||||||| |||||||||| ||||||||||| ||||||||||| || | || ||| | Sbjct 11261 TTCGGTCTTATACAGCGACTTTCCGTCGATGTTTACGCGACGATAACGTGGCATTGGATA 11202 Query 26181 ACTCCTT 26187 || |||| Sbjct 11201 ACCCCTT 11195 Score = 439 bits (486), Expect = 8e-119 Identities = 655/922 (71%), Gaps = 12/922 (1%) Strand=Plus/Minus Query 26513 TTTTCTTCGGTGGTCAGGGGCATGTCGCCCTCCTTCTCA-GGTTGAT--CAGGCCGAGCC 26569 || ||||| ||||| | ||||||||||||||| | | ||||| | |||| | || Sbjct 10874 TTCTCTTCAGTGGTTAAAGGCATGTCGCCCTCCGTTTGGTGGTTGGTTGCAGGTTGTCCC 10815 Query 26570 TGACGATGGGTGAAAATGTTCTTGATGCTGTTGGCCACCATGGCGACCCAGGACTCTTGC 26629 || ||| |||||| | || | ||||||| || | | |||||||| || ||| Sbjct 10814 TGCGGAT---TGAAAAGGGATTTAACTTTGTTGGCGACGACCGTCACCCAGGATTCCTGC 10758 Query 26630 CGGACAACGGGCTGGCCGGACTCGTCGAAGACGATCTTCCCTGCCTCGACCTTGTAGCCG 26689 || |||| || ||||| || |||||| ||| || || |||| | ||||||| Sbjct 10757 CGCGCAACCGGTGTGCCGGTTTCATCGAAGGTGATTTTTCCGCCCTCCGACGTGTAGCCA 10698 Query 26690 TACACCTCGGTCACACCGCCGTTGAGGCTGATCACGGCCTGGGAATCGGTGAAATCGGCA 26749 || |||| || | ||||||||| || ||||||| |||| || |||||||| || || Sbjct 10697 TAAACCTGGGCAGCGCCGCCGTTGCGGATGATCACCACCTGTGAGTCGGTGAAGTCTGCC 10638 Query 26750 ACCCATGCGTACTGGTCGGGGCCGGAGGCGAATCGCTCCTTTGCGGCTCGGTCCAGGCGC 26809 ||||| || || | | ||||| || ||| || ||||| || ||||| ||||| Sbjct 10637 ACCCAGGCATATTCATTTTCGCCGGGAGCAAATTTATCTTTTGCAGCGCGGTCTAGGCGT 10578 Query 26810 TGCTCACGCTCCCGGTAGGACTCGCCAACCAAGGCGCCGGAGTTCGGCTGAAGCGGCACA 26869 |||||||| ||||||||||| ||||||| ||| ||||| ||||| | || | |||| | Sbjct 10577 TGCTCACGATCCCGGTAGGATTCGCCAATCAACGCGCCAGAGTTGGCCTTTAACGGCGTA 10518 Query 26870 GCCTGGTCCGCGTTCACCATGAGGCCGACGCCCTGCTCAGGAGTGGCCGCCCCTACCTCA 26929 || |||| ||||| ||||| || || || ||||||||||| || || || || || ||| Sbjct 10517 GCAAGGTCAGCGTTAACCATCAGCCCAACACCCTGCTCAGGCGTCGCTGCGCCCACTTCA 10458 Query 26930 TGCAGCAGGATCGCGTCGTGGTCCATGCTCTGGATGTCGGCGACCCACTCCGCGCCTTGG 26989 ||||||| ||| ||||| || ||||||| || || | || ||||||| || ||| | Sbjct 10457 TGCAGCAAGATTGCGTCATGATCCATGCCGTGAATCTTCGCCACCCACTTGGCACCTGTG 10398 Query 26990 GCGCGCTGGCTTTCGTTCGGCTCGATGCGGTTGAGGAATGCGGCAACGCTGGTATGGATC 27049 | ||| || || ||||| | ||| ||| || | ||||||||||| || || Sbjct 10397 TCCTTCTGTTGCTCATTGGGCTCAAGCTGGTCGAGAAACACCGCAACGCTGGTGTGAATA 10338 Query 27050 GGGGGAACGTCCTCCCCCTTCTCCAGCGCCTCGACGCGCTGCAACAATTCACGACCGCCT 27109 || ||||| || || || ||| | ||||| ||||| | | || | ||| || Sbjct 10337 GGTGGAACATCTTCGCCGCGCTCAATGGCCTCTACGCGGGAGATAAGCTCCCTACCTCCC 10278 Query 27110 TCCGTGGACTTGGCGAACTCGACGTCGACCCACTTCTCCATGTAGACCCGGTTGCCTGAC 27169 || | || || | || | || ||||||||||||| ||||| ||||||||| || Sbjct 10277 TCGCTCTGGTTAGCAATCTGGGTATCAACCCACTTCTCCAGGTAGATCCGGTTGCCCGAT 10218 Query 27170 TTCTTCACGTTGCGGTTCCAGGCGCCGACGTGGGCGGCGTTGATCCCTTCAGGCGAGAAC 27229 |||||||| ||||| ||||||||||||| ||| | |||||| |||||||| || || Sbjct 10217 TTCTTCACATTGCGATTCCAGGCGCCGATATGGCCCTGGTTGATACCTTCAGGAGAAAAG 10158 Query 27230 GCCGAAACGAACTTCCCGTCGACCATCGGGTGGCCGAGCGGCGCGAGCGTTCCCTCCAGC 27289 || || | ||| || | | | || || || |||||||| ||||| || |||||| Sbjct 10157 GCAGAGATGAATGCGCCATTTAGCTGAGGATGCCCCAGCGGCGCCAGCGTGCCTTCCAGC 10098 Query 27290 CCTGGGTAGTGCCTGTCGATCT-GCTCGGCGGTGTAGAGACCACCGTTCATGATCACCCC 27348 ||| | ||||| ||||| | ||| ||| || || || ||| | ||||||| ||| Sbjct 10097 CCTTGATAGTGAGCATCGATTTCGCT-GGCCGTATACAGCCCATCATTCATGACCACGTT 10039 Query 27349 GGCCGGCAGGGTGTAGCTCGGCAGAACCAGGTGTTCGCGCCCGTTGTAGGTCTCACGTCG 27408 |||||||| |||||||| |||| ||| || || ||||| |||||||| | ||| || || Sbjct 10038 TGCCGGCAGTGTGTAGCTAGGCAAAACAAGATGCTCGCGGCCGTTGTATGACTCCCGGCG 9979 Query 27409 AAT--ACTGGCGCTGTTGACCT 27428 ||| ||| |||||| |||| Sbjct 9978 AATTGCCTG--GCTGTTTACCT 9959 Score = 228 bits (252), Expect = 3e-55 Identities = 1324/2095 (63%), Gaps = 87/2095 (4%) Strand=Plus/Minus Query 27547 CGGGTTCCCTTCGTCGTCGACCAGCACCTCGACCTGGCTGCACTTGCAATTTATTGAGTT 27606 |||||| || || | || ||||| || ||||| | || |||||||| |||| ||| Sbjct 9805 CGGGTTACCAGCGGCATCCACCAGAACGGACACCTGCGTACATTTGCAATTAATTGCGTT 9746 Query 27607 TCCGTCTCGGCTGTACCAGTCCCTCACCTCATCCGAGGTGTAGAGCCTGGCGTGCCTGGC 27666 |||| ||||||||| || | ||||| || |||||| || || ||||| Sbjct 9745 ACCGTTGACGCTGTACCACTCTCGAACCTCTTCAATGGTGTACAGATGTGCATGCCTTAA 9686 Query 27667 CGCATGGGTGGTCCTTGTGCTGGGGGAC--AGGGCCGACATGTGCATCAGCTTCGACTGG 27724 || || ||| ||| || |||| | || || | ||||| ||||| | || | Sbjct 9685 GGCGTGAT--GTCGCCGTGTTGTAGGACTTAATGCGGAAAGGTGCAGAAGCTTGGTCTTG 9628 Query 27725 ACGCCGTAATCGGCCTCAGCAGCGTCTTTCTCGTCCCAGCGAGCCCTTCGGAGTGCGGTA 27784 | |||||| | | || ||| | | | || ||||| || || | | ||||| ||| Sbjct 9627 ATTCCGTAACGGTCTTCTGCATCCTGTGCTTCATCCCATCGTGCGCGCCTCAGTGCAGTA 9568 Query 27785 GTGACCTCAGTGCGGGCGATGCGATGACCTCGACGCGCCTCGATGCCGGTCTGGGCAGTC 27844 |||| || || | ||||||||||| | || || | || ||||| || || | | Sbjct 9567 GTGATTTCCGTCCTGGCGATGCGATTCGCGCGCCGGGTTTCAATGCCAGTTTGCTCGTTG 9508 Query 27845 AGGTCCCGCGCAATCTCGCGGGGATTCTTCCCGCGCCCCATGCCTTCGGCGAGAATGCGC 27904 |||| || | || || || || || | | ||||| || | ||||| ||| Sbjct 9507 AGGTTTTTGGCTACGTCCCGCGGGTTTAGTCCTCTGGCAATGCCATCAGTCAGAATTCGC 9448 Query 27905 GCCATGTCGGCCTTGACTTGGCCGGACAAGCCCTTCATCTCCTCGAACTCCCGGGCGCGA 27964 ||||| ||| ||| || || || | || |||||||| ||||| || || || | Sbjct 9447 GCCATATCGCTCTTAACCTGAGCGCTGAGCCCTTTCATCTCTTCGAATTCACGCGCTCTG 9388 Query 27965 AGCAATGCCATCCGCGCGCGGTAGGCGTCAG--ATC--GAAGCAGG--ACATCCAGCGAT 28018 | || || |||| | |||| ||| | | || | || |||||| || Sbjct 9387 ACCAGAATCAGCCGCAGTTGATAGGGCTCACTCAACAAGATGTTGGGAACATCCTGCT-- 9330 Query 28019 TCCCGGCCGGCGCGGTATGCAGGCGATTGCTGCGCCAGGTTGGCGTGGGTCTGCGCAGTC 28078 |||| || ||| || | |||||||| | |||||| | |||||| || Sbjct 9329 ----GGCCTGCAGCGTAAGCGGAGGATTGCTGGGAGAGGTTGTAATACTCCTGCGCCGTT 9274 Query 28079 CCGCGGATGTAGGCAACCCCGACGTAGGACTCGAAGAACCAGAGGTCACGCTCCCCGCCC 28138 || || ||| || || || ||| | |||||||| | | |||||| ||| Sbjct 9273 CCTCGCCGGTAAGCCACGGACACATAGCGGCCAAAGAACCACAAATTGAACTCCCCACCC 9214 Query 28139 TCCTGCAGTATCTCGTCGACCATCAGGTTG---GTGTCGGCGAAG-ATCGCGGAGAGAAG 28194 ||| |||| || ||||| |||| | | || || | | || |||| | ||||| Sbjct 9213 TCCAGCAGAATTTCGTCCACCAGC-GCTTCACCGTTCTGAAGCAGCATCG---ACAGAAG 9158 Query 28195 GGCCTGGTCGAGACGGTAGGTGTACTGCTCGTTCACCACCGGTTGGGCCGGGATTCGATC 28254 |||| || |||||| ||||||| ||||||| || || |||| || ||||| || | Sbjct 9157 CCCCTGCTCAAGACGGAAGGTGTAGCGCTCGTTTACGACGGGTTCGGAGGGGATGCGGTT 9098 Query 28255 CAGGGCGGCCACGTAGCCATCCCTGATCTTCCGCATGCGCCTGTCGAACTCGCGCATTGC 28314 ||| | | | |||||| | | | ||| | ||||||| | | ||||| ||||| || Sbjct 9097 GAGGATGTCGATGTAGCCTTTCGTTATCAGCTTCATGCGCTTTGCAAACTCACGCATGGC 9038 Query 28315 GCCTCTTTCCAGGCGATCTACCCCGGTCGGGTCACTGCTGCTCGCCGGTAGGATCGGTGC 28374 ||| | || | ||| || || || || || || | | ||| ||||| || | Sbjct 9037 GCCACGCTCTAACTTATCAACTCCTGTGGGATCTTTGAGGTTGCTCGGCAGGATTGGAGG 8978 Query 28375 GCGCGGCATCTTCATCCTCCGGTTCGGTATCAGGCAGCGGGTCACCGCCCACGAGCGGGT 28434 || || || || ||| | || || || || || ||||| | | | Sbjct 8977 CTTAGGTTTCGTCGTCATCCCCT---GTCTCTCCAAGAGGCTCGCCGCCTTCA---GTTT 8924 Query 28435 CGTAGCCAGCCTCTTCGCGGATCTCCTCCGCGGTGAATACCGGCTCGCCAGTGCCGATTG 28494 || | || || | ||| || ||||| || |||| |||| | || ||| || Sbjct 8923 CGAATCCTGCAGCAGTGCGAATTTCCTCACCGCTGAACGGCGGCGCATCA---CCGCTTT 8867 Query 28495 CGGC----GC--TGTTGATCTCGCTCATGGTCTTGGAGTTGGCCAGGCGCTCGGCCTTGG 28548 | | || |||| | ||| ||||||||| |||| |||||||| || || | Sbjct 8866 CAACCATAGCCTTGTTCACCTCTGCCATGGTCTTAGAGTCCGCCAGGCGTTCTGCGCGAG 8807 Query 28549 TTGGAACGGTGAGGTCATCCCAGATTGCCGTGAACTCGGCCTTCAGAGG-GACCACGCCG 28607 | | |||| ||||||||||| | || || |||| |||| || | | Sbjct 8806 TCTGTTGATTGAGATCATCCCAGATGACTGTTTTCT-GGCCGACAGAATCGATAATTCTC 8748 Query 28608 ATGCGCATCAGGTGCCCGAACAGGTCGTTGATCTCGAACGTCAGTTCTTGCACC-CGGCG 28666 | | ||||| | || | | || | || ||||||| ||| || ||| ||||| Sbjct 8747 AGGTCGATCAGCTTGTCGCAGAATTCCTCAATTTCGAACGACAGATC----ACCGCGGCG 8692 Query 28667 CGCCTGGCATCTGGCGTTGTGGTACTTCTGGTCCTCACTGCTCGCCCGCTC-GCCGGTCT 28725 |||||| | |||| |||||| ||||| || |||| | || || ||| || | Sbjct 8691 ACTCTGGCAGCGCCCGTTCATGTACTTTTGGTCTTCGGTGCTTGAGCGTTCAGCCTGT-T 8633 Query 28726 GCATGCCCACCAGGATCTTGGTCGGGATGTCGACGCNNNNNNNNNNNGTTTGCAGGTTGA 28785 | |||| ||||| ||| | || || || |||| || |||||||| | Sbjct 8632 GGTTGCCTACCAGTATCCGCGAAGGAATATCAACGCCGGCAGAAGCCGTCTGCAGGTTCA 8573 Query 28786 CGTTGTAGGTCGGGCCAGGGTCGGATACCGCAGAGACCAGCTGAGTGGCCGTCGCCCCTT 28845 || ||||| |||| ||||| || || | || || || || | | || || | Sbjct 8572 CGGCATAGGTTGGGCTTGGGTCAGACACAGGGGAAACTAGGGAGGTAACAGCGGCGCCCT 8513 Query 28846 G---GGTCGGAAGCATCACGTCGTTGCCGCGGTTCAGCTGGCGTGTGGCATCGTTGAACC 28902 | | || ||||| | |||||||||||||||| || || | ||| ||||||||| Sbjct 8512 GCAGGCTCATAAGCA---CATCGTTGCCGCGGTTCATCTCTCGCGCGGCTTCGTTGAACT 8456 Query 28903 GCTGGTTCAGCTGGTCAAGCGAGACGCCGTACATCGAGGCGATGTTGTTGAGGTCGATTT 28962 | | || | ||||| ||| || ||||| || || | || || |||||| | Sbjct 8455 TGTCCTGCAATTCGTCAACGCTGACACCATACATAGACGCCAAACTGCCGAAGTCGATCT 8396 Query 28963 CCTTGTCGAAGTTCAGTAGGAGCTGGCGTGCGGCGTTCTTCAGGAACGATTCGCCACTGC 29022 | |||||||| | || ||||| || || |||||||||||||| || || || | Sbjct 8395 CTTTGTCGAAACTTAGCGCCAGCTGCCGAGCTGCGTTCTTCAGGAATGACTCACCGGAAC 8336 Query 29023 CTCCCTCGACCTTCTCCAAGCTGATGAAGGAGTTGTAGGCAGGCTCCAGGAATCCGATTG 29082 | ||||| || ||||||| ||||| ||| | |||||| || ||||| ||||| ||||| | Sbjct 8335 CGCCCTCTACTTTCTCCAGGCTGACGAATGCGTTGTATGCTGGCTCAAGGAACCCGATAG 8276 Query 29083 CATCGCCGGTCCAGTCTCCGAGAATGAACACCCGGTCCGGATGGATATCTCGCACCAGAC 29142 | ||| |||| |||| || || ||||| | |||||| |||||||| | | || Sbjct 8275 CGTCGTCGGTGTAGTCGCCAAGGATGAAGATCCGGTCTGGATGGATTT----CGACACGT 8220 Query 29143 CGGGACGACCGGCTTGGGAGGC-CTCGGTGTATTCCCACATGGTGGGCTGCCCGTAGGT- 29200 || | | | ||| || | ||| ||||||| |||||| | ||||| ||||| || Sbjct 8219 CGCGTGGCTCCATTTGAAAGCCGCTCTGTGTATTGCCACATCTTCGGCTGGCCGTATGTT 8160 Query 29201 --CTCGCTA--TCCTGTTTCTCGTCAAACGTCTTGGGCTTAAGGCACCCGGCCCAGGCCG 29256 | | || || || || || || || | || || | || |||||||| Sbjct 8159 TGCGAGTTAAGCCCGGTATC---CCACTCG-CTCACG-TTTAGTGAACCAGCCCAGGCTA 8105 Query 29257 GGGTGACCTTCGCCAGGCCATTGACCTTTCCCGTGACAGGCCTGTCCCACGGCTGGCTAT 29316 ||||| ||| | ||||| | | || || | || | | ||| || | | ||| Sbjct 8104 CTGTGACTTTCTCGAGGCC-TCGCCC--TCTGGCTACTTCGGTATTCCATGGTTTGTTAT 8048 Query 29317 CCCTGATGTGCAAGAGCAACCCGGAATAACGACCAACAAGGCGGCGCCGGTCGGCTTCGG 29376 | | |||||||| | | || || ||||| || ||||| || || ||||| || || | Sbjct 8047 CGCGGATGTGCAGCAAAATGCCAGAGTAACGCCCGACAAGCCGCCGGCGGTCAGCCTCTG 7988 Query 29377 AGACAGCCCGCCAGAACCTGCCGCCTGCTATCAACGGCTTGTTCTTCCTCTCCCACTCGG 29436 | ||| ||||| |||| | | || | | | ||| || ||||||| | | Sbjct 7987 CAAAAGCGCGCCATAACC-GGTTCGTG--AATACTTGTTTGAGTTTTTTCTCCCAGGCAG 7931 Query 29437 TTTCGTCCTTGGAGCGGTCCTGGTC------GTCACCCTCGATGATCTGCGGATTCGTCT 29490 |||| | ||| | || ||| ||||| ||||| || | || || |||| Sbjct 7930 TTTC------TGCGCGCTTCTCGTCAGATTGCTCACCTTCGATAATTTCAGGGTTAGTCT 7877 Query 29491 TCCAGCAAGTGGTGACGATCTTCTCGACCGCGCCATGGGCAATACCGCCCCGCCGGTACA 29550 |||||| || || | ||| || || |||||||| |||||||| || || || |||| Sbjct 7876 GCCAGCATTTGCCCACCAGCTTTTCCACTGCGCCATGCGCAATACCACCGCGGCGATACA 7817 Query 29551 TGGTGTACAGGTCGTTGAACGTGATTTCCTGAGGGAAACCATACTCGCACCATGC 29605 | || |||| || | | ||||| | || ||| || || || |||||||| || Sbjct 7816 GTGAATAAAGGTTGTCGTAAGTGATCTGCTCAGGAAAGCCGTATTCGCACCAGGC 7762 >seq40766 Length=2566 Score = 163 bits (180), Expect = 9e-36 Identities = 291/422 (69%), Gaps = 7/422 (2%) Strand=Plus/Plus Query 23937 CACCACACATGCAGCCACCGCGCGCGATCCAAAGACCGCCGTGTGCGGTCTGGGTTGGGT 23996 |||| ||||||||||| || | ||||| | |||| | || | | ||||||| Sbjct 2120 CACCGCACATGCAGCCGCCCTTGCCAATCCAGACACCGGCAAAAGCCTTGTTTGTTGGGT 2179 Query 23997 TCGGGGGAATCAGCCCCGTCGCACATCCGTACTTGTCCAGGGCGTTCAGCAGGGCCAACT 24056 || |||| ||| || || || || || | |||||||| || ||||||| || | Sbjct 2180 CAGGTGGAACCAGGCCTGTAGCGCACCCTTTTTTGTCCAGCCCGCGCAGCAGGTTCAGCG 2239 Query 24057 GCGCCTTCCAGCGATCAGCAAAGGCCTGGTAGCGAAACGATCGAGAAGCACCAGATGGGG 24116 | ||||||||||||| ||| | ||| ||||| ||||| || || || || ||| | Sbjct 2240 CCCCCTTCCAGCGATCGCTAAATGACTGATAGCGGAACGAACGCGATGCTCCGCTTGGCG 2299 Query 24117 CCGTCTGGCTGCTGATGTACTTGTCGGCCTGGGCCAGGGCGAATAGCGCCAGCAGGTAGG 24176 |||| || ||||||||| || ||| ||||| | | | | ||| | || || ||| Sbjct 2300 CCGTTTGAGAGCTGATGTATTTATCGCCCTGGCCTAATCCCATGAGCCCGAGAAGATAGA 2359 Query 24177 CCTGAATCAGCAGCGCGGTCGATGCCGGGTAGTGGGCATCCAGACATTCTTGAACCTGCT 24236 || || || | || || ||||| ||||| | |||||||||||||| |||| |||| Sbjct 2360 GTTGGATGAGTAATGCTGTTGATGCTGGGTAATTCGCATCCAGACATTCCTGAA--TGCT 2417 Query 24237 G--CAACTGCTCGATCCACGCCGCGAGGATGAAATCGGGCACGTTGTCGATGCCCTGGCT 24294 | || |||||| | | ||| | |||| |||||| |||| | | ||| ||||| Sbjct 2418 GTTCACCTGCTCCACCAGCGCATCCAGGACGAAATCAGGCAAGGT---GATACCCTGTGA 2474 Query 24295 CTGCAGGTACTGCCGGGCCTGTTCAACTGTGATCATGTCCGATTCCTGGAAGAAGAAGGC 24354 || ||| || | | ||||| ||| || | |||| | |||||||| ||||||||| | Sbjct 2475 CTCCAGATATTCCTTGGCCTTTTCTTTAGTCACCATGGCTGATTCCTGTAAGAAGAAGCC 2534 Query 24355 CC 24356 || Sbjct 2535 CC 2536 >seq64117 Length=1006 Score = 91.5 bits (100), Expect = 5e-14 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 5189 ATGAAAGAACGTCCGATCCTATTCAGCGGGCCGATGGTTCGAGCCATCCCGGAAGGCCGG 5248 ||||||||||| || ||||| ||||||| ||||||||| || || | | | |||| | Sbjct 867 ATGAAAGAACGACCAATCCTGTTCAGCGCGCCGATGGTCCGCGCGCTGCTTGCAGGCACG 926 Query 5249 AAGACGGTCACGCGCCGAGTCGTGAAGCCGCAGCCCGACT 5288 ||||| |||||||| ||||||||||||||||| |||| Sbjct 927 AAGACCCAGACGCGCCGCGTCGTGAAGCCGCAGCCTGACT 966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160023282214140