Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq44513 289 2e-73 seq27891 87.8 1e-12 >seq44513 Length=555 Score = 289 bits (320), Expect = 2e-73 Identities = 331/440 (75%), Gaps = 6/440 (1%) Strand=Plus/Plus Query 78723 GCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTGATTATCCGAGACGAAGCAGTTC 78782 ||||||||||||| |||||||| || ||||||| |||| || || ||||| || || | Sbjct 1 GCGCCAAGCTGACCAACACCGCCGATCTGATCCGCCTGATCATTCGCGACGAGGCGGTGC 60 Query 78783 ATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTCGAGACCCAGGGGCCGGCGC--G 78840 | || ||||| ||||| || |||| |||| ||| || |||| || || || ||| | Sbjct 61 ACGGCTACTATATCGGCTATAAGTTCCAGAAAGGGCTGGAGAA--AGTGGACGCCGCACG 118 Query 78841 GCAGGCTGAGCTCAAGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTG 78900 || || | || | | | | ||||||||| | ||| || |||||||||||| | Sbjct 119 GCGCCAACAGGTGAAAAATTTCGCCTTCGATCTGATGCAGGACCTGTACGACAACGAG-G 177 Query 78901 TG-ACTACACCGAGCAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCC 78959 || |||||||||| |||| || |||| |||||| || || || || |||| |||| Sbjct 178 TGCGCTACACCGAGGAGCTGTACGACGGCGTCGGCTGGACGGAAGACGTGAAGACCTTCC 237 Query 78960 TGCGCTACAACGGCAACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGG 79019 ||| |||||||| ||||||||||||||||||||| || || ||||| |||||||| || Sbjct 238 TGCACTACAACGCCAACAAGGCGCTGATGAACCTGGGGTATGAAGCGCTGTTCCCACCGG 297 Query 79020 AAGAGACCATGGCAGACCCGGCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACC 79079 | | || ||||||| ||| |||| ||||| || ||| || |||||| |||| Sbjct 298 CGATGGCGGAGGTCAACCCGGCGATCCTGTCGGCGCTGTCGCCAAACGCCGACGAAAACC 357 Query 79080 ACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCGGCAAAGCTGAAGCCACGGCAG 79139 ||||||||||||||||||| || ||| ||||||||||||||| || | ||| | | Sbjct 358 ACGACTTCTTCTCCGGGTCAGGGTCGTCCTACGTCATCGGCAAGGCGGTCAACACCGAGG 417 Query 79140 ATGAGGACTGGGACTTCTGA 79159 |||||||||||||||||||| Sbjct 418 ATGAGGACTGGGACTTCTGA 437 >seq27891 Length=880 Score = 87.8 bits (96), Expect = 1e-12 Identities = 56/60 (93%), Gaps = 1/60 (2%) Strand=Plus/Minus Query 4267 GTAGCTCAATTGGAAGAGCAGCGGTCTCCAAAACCGCCGG-TGTAGGTTCGAGTCCTGCC 4325 ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| || Sbjct 111 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGTAGGTTCGAGTCCTACC 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298477872835148